Novosphingobium capsulatum: U0041_06130
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Entry
U0041_06130 CDS
T10206
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
ncp Novosphingobium capsulatum
Pathway
ncp00541
Biosynthesis of various nucleotide sugars
ncp01100
Metabolic pathways
ncp01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
ncp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
U0041_06130 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ncp01005
]
U0041_06130 (kdsB)
Enzymes [BR:
ncp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
U0041_06130 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
ncp01005
]
Lipid A
U0041_06130 (kdsB)
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GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
YodE
Motif
Other DBs
NCBI-ProteinID:
WQD94159
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Position
1340513..1341334
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AA seq
273 aa
AA seq
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MSSSSSALIVVPARHGSTRLPGKPLLTIAGRTLLERVHAVARAAAELAGNCAVVVATDDA
RIAAHAQAIGAAVTMTDSALDSGSSRAYAAAAAWPDRPDLVINLQGDAPFVPPAVVAGLI
ATLRGGEADVATPVYRLDWQRLDRLRAHKQTAPFSGTTCIRDAQGRALWFSKTILPAIRD
EAKLRASEPLSPVWQHLGLYGYRLAALEWFAQVPQSPTERLEGLEQLRFLEAGRTIATIA
VDPPLHAMSGIDTPADLALAEAAIARLGDPYPL
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgtcttcctctgccctgatcgttgttccggcgcgtcatggttcgacgcgcctg
ccgggcaagcccctgctgaccatcgctggccgcacgctgctcgaacgcgtgcatgccgtg
gccagggctgcggcagaactcgccgggaattgcgcggtggtggttgccaccgatgacgcg
cgcatcgcggcgcatgcccaggcgatcggcgcggccgtgacgatgaccgacagcgcgctc
gattcgggttcctcgcgcgcctatgccgccgccgccgcctggccggatcggccagacctg
gtcatcaacctgcagggtgatgcgccgttcgtgccgccagcagtggtggccgggctgatc
gccacattgcgcggcggcgaagcagacgtggcgacgccggtctatcggctcgattggcag
cggctggaccgcttgcgcgcgcacaagcagaccgccccgttcagcggtacgacctgcatc
cgcgacgcccagggccgcgccttgtggttttccaagacgatcctgccggccatacgcgac
gaggccaagctgcgcgccagcgagccgctgtcgccggtgtggcagcatctcgggctctat
ggttatcgcctggcggcgctggaatggtttgcccaggtgccgcaaagcccgactgagcgc
ctggaaggcctggaacagttgcgctttctggaagcggggcggacgattgcgacgatcgcg
gtcgatccgccgcttcatgccatgtcgggcatcgatacgccggccgatctggccctggcc
gaggcggcgatcgcccggctgggcgatccctatccgctgtga
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