Novosphingobium capsulatum: U0041_07520
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Entry
U0041_07520 CDS
T10206
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
ncp Novosphingobium capsulatum
Pathway
ncp00470
D-Amino acid metabolism
ncp00550
Peptidoglycan biosynthesis
ncp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ncp00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
U0041_07520 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
U0041_07520 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ncp01011
]
U0041_07520 (murD)
Enzymes [BR:
ncp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
U0041_07520 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
ncp01011
]
Precursor biosynthesis
Amino acid ligase
U0041_07520 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
Motif
Other DBs
NCBI-ProteinID:
WQD94422
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Position
1629886..1631181
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AA seq
431 aa
AA seq
DB search
MIVSPAFAGKKYAVLGLARSGMATVECLLASGALVTAWDAREEPRAALEGRVTLADPLAI
DLAGFAGIVVSPGVPLNRHPIAAHARAAGVPVIGDIELFAQARGDLPPHRVVAITGTNGK
STTTALTHHLLQQAGVPTLMGGNIGKPILEQQPLPAGGVYVLELSSYQIDLTQRLDADVA
ILLNLSPDHLDRYDGYDGYVASKARLFGMQAPGHLALVDMRAELDDDVLRFAPEGANFTF
INAIDLPGDPAQWPSLQGPHNRANAAAAVGAARYLGLDEPTIEAGLASFVGLPHRMERVA
QKDGVLFVNDSKATNPASTAPALAAFPRIHWIVGGLPKGDDLDECAPHFSHVVRAYTIGE
AGPRFAEILEPVLPVTRAEMLGDAVRAAMAQAVPGDVIMLSPACASFDQFRDFEARGECF
RQIVAALTAGS
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtctcgcctgcctttgctggaaaaaagtatgccgtgctcggcctagcgcgctcg
ggcatggccacggtggaatgcctgctggccagcggcgcgctggtcaccgcctgggatgcg
cgcgaggaaccgcgcgccgcgctggaagggcgcgtgaccctggctgatccgctggcgatc
gacctggctggttttgccgggatcgtggtttcccccggcgtgccgctcaaccgccacccg
atcgccgcccatgcccgcgccgctggcgtgccagtaatcggcgatatcgaactgtttgcc
caggcgcgcggcgatctgccgccgcaccgcgtggtggcgatcaccggcaccaacggcaaa
tccaccaccacggcgctgacccatcatctgttgcagcaggccggcgtgcccaccttgatg
ggcggcaatatcggcaagccgatcctggaacagcagccgctgcccgctggcggcgtctat
gtgctggaactgtcgagctatcagatcgatctgacgcagcggctcgatgccgatgtggcg
atcctgctcaacctcagccccgatcaccttgatcgttacgacggctacgatggttatgtc
gcgtccaaggcgcggctgtttggcatgcaggcgccgggccacctcgcgctggtggacatg
cgggcagagcttgacgacgacgtgctgcgctttgccccggaaggcgccaacttcactttc
atcaacgcgatcgatctgcccggtgatccggcgcagtggccatcgctacagggcccgcac
aaccgcgccaatgccgccgctgcggtgggcgcggcgcgctatctcgggctggacgagccg
acgatcgaggccggcctcgccagcttcgtgggcctgccccatcgcatggaacgcgtggcg
caaaaggacggcgtgctgttcgtgaacgacagcaaggccaccaatccggcttccaccgcg
ccggcgctcgccgcctttccgcgcatccactggatcgttggcggcctgcccaagggcgat
gacctggacgaatgcgcgccgcatttcagccatgtcgtgcgcgcctataccattggcgag
gcgggcccgcgctttgccgaaatcctggagccggtgctgccggtgacgcgcgccgagatg
ctgggcgatgccgtgcgcgccgccatggcccaggccgtaccgggcgatgtgatcatgctg
tcgccggcctgcgccagtttcgaccagttccgcgatttcgaggcgcgcggcgaatgcttc
cgccagatcgtcgccgctctcacggcagggagctga
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