Novosphingobium capsulatum: U0041_08455
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Entry
U0041_08455 CDS
T10206
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
ncp Novosphingobium capsulatum
Pathway
ncp03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
ncp00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
U0041_08455 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
ncp03011
]
U0041_08455 (rpsA)
Ribosome [BR:
ncp03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
U0041_08455 (rpsA)
Bacteria
U0041_08455 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
S1_2
SH3_16
RuvA_N
MazE_antitoxin
Motif
Other DBs
NCBI-ProteinID:
WQD94597
LinkDB
All DBs
Position
complement(1826478..1828178)
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AA seq
566 aa
AA seq
DB search
MSTNPTRDDFAALLDESLGAGATGGFEGRVVKGTVTAIENDKAVIDVGLKSEGRVALREF
AAPGQPHGLKVGDEVEVFVDRVENAEGEAMLSRDRARREAAWDKLESEFGEGKRVEGVIF
GRVKGGFTVDLDGAVAFLPGSQVDIRPVRDVTPLMDMPQPFQILKMDRRRGNIVVSRRAV
LEETRAEQRSGLIQNLKEGQIIDGVVKNITDYGAFVDLGGIDGLLHVTDMSYKRVNHPSE
VIAIGDTVRVQIIRINQDTQRISLGMKQLESDPWDGVAAKYPVGAKLRGTVTNITEYGAF
VELEPGIEGLVHVSEMSWTKKNVHPGKIVSTSQEVDVMVLEVDSDKRRISLGLKQAQQNP
WEGFAEKHPVGSIVEGEVKNATEFGLFIGLDGDVDGMVHMSDIAWGISGEDALALHRKGE
QVKAVVLDVDVDKERISLGMKQLEKGAPAAGGVATSGSLRRGEVVTVTVLEVRDGGLEVQ
AGEDGATGFIKRSDLGRDRDEQRPDRFQVGQKIDAMVTGFDRSKKPNFSIKARQLAEEKE
AVEQYGSSDSGASLGDILGEALKARG
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccaacccgacgcgcgacgatttcgccgcgctgcttgacgaatcgcttggcgct
ggcgccaccggtggctttgaaggccgcgtcgtcaagggcaccgtaaccgccatcgaaaac
gacaaggccgtcatcgacgtgggcctgaagagcgaaggccgcgtggccctgcgcgaattc
gccgcccccggccagccgcacggcctcaaggtcggcgacgaagtcgaagtgttcgtcgac
cgcgtcgagaacgccgaaggcgaagccatgctcagccgcgaccgcgcccgccgcgaagcc
gcctgggacaagctcgaatccgaattcggcgaaggcaagcgcgttgaaggcgtgatcttc
ggccgcgtgaagggtggcttcaccgtcgacctcgacggcgccgtggccttcctgcccggc
tcgcaggttgacatccgccccgtgcgcgacgtgaccccgctgatggacatgccgcagccg
ttccagatcctcaagatggatcgccgccgtggcaacatcgtcgtgtcgcgccgcgccgtt
ctggaagaaacccgcgccgaacagcgctcgggcctgatccagaacctcaaggaaggccag
atcatcgacggcgtcgtcaagaacatcaccgactacggtgcgttcgttgacctcggcggc
atcgacggcctgctccatgtcaccgacatgagctacaagcgcgtcaaccacccgagcgaa
gtgatcgccatcggcgacaccgtgcgcgtccagatcatccgcatcaaccaggacacgcag
cgtatctcgctgggcatgaagcagctggaaagcgatccgtgggatggcgttgccgccaag
tacccggttggcgccaagctgcgcggcaccgtcaccaacatcaccgaatacggcgccttc
gtggagctggaaccgggcatcgaaggcctggtccacgtttcggaaatgtcctggaccaag
aagaacgtccaccccggcaagatcgtttcgacgagccaggaagtcgacgtcatggttctg
gaagtcgacagcgacaagcgccgcatcagcctgggcctcaagcaggcgcagcagaatccg
tgggaaggctttgccgaaaagcacccggtcggttcgatcgtggaaggcgaagtcaagaac
gccaccgaattcggtctgttcatcggcctggatggcgacgtggacggcatggttcacatg
tccgacatcgcctggggcatctcgggtgaagacgccctggccctccaccgcaagggtgag
caggtcaaggccgtggtcctcgacgtcgacgtcgacaaggagcgcatctcgctcggcatg
aagcagctcgaaaagggcgctccggctgctggcggcgttgccacctcgggctcgctgcgt
cgcggcgaagtcgtcaccgtcactgtcctcgaagtccgcgatggcggcctcgaagtgcag
gctggcgaagacggcgcgaccggcttcatcaagcgttcggacctgggccgcgatcgtgac
gaacagcgtcccgaccgcttccaggttggccagaagatcgacgccatggtcaccggcttc
gaccgttccaagaagcccaacttctcgatcaaggcccgtcagctggccgaagaaaaggaa
gcggtggaacagtacggttcgtcggactcgggcgcttcgctcggcgacatcctcggcgaa
gccctcaaggctcgcggctga
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