Novosphingobium capsulatum: U0041_10040
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Entry
U0041_10040 CDS
T10206
Symbol
nusA
Name
(GenBank) transcription termination factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
ncp Novosphingobium capsulatum
Brite
KEGG Orthology (KO) [BR:
ncp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncp03021
]
U0041_10040 (nusA)
03009 Ribosome biogenesis [BR:
ncp03009
]
U0041_10040 (nusA)
Transcription machinery [BR:
ncp03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
U0041_10040 (nusA)
Ribosome biogenesis [BR:
ncp03009
]
Prokaryotic type
rRNA transcription factors
U0041_10040 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
S1
HHH_5
KH_2
KH_1
KH_NusA_C
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
WQD91363
LinkDB
All DBs
Position
2187722..2189368
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AA seq
548 aa
AA seq
DB search
MASAISANRAELLAIANAVAAEKMIDKSIVIEAMEEAIQKSARNRYGAENDIRAKLDPRT
GDLRLWRVVEVVEHVEDYFKQVDLKQAEKLQAGAKVGDFIVDPLPPVDLGRIDAQSAKQV
IFQKVRDAERDRQYDEFKDRAGEIITGVIKSVEFGHVIVNLGRAEGVIRRDQQIPREVPR
VGERVRALILKVERQNRGPQIFLSRAHPDFMKKLFAQEVPEIYDGIIEIKAAARDPGSRA
KIGVISRDSSIDPVGACVGMKGSRVQAVVQEMQGEKIDIIPWSEDTATFVVNALQPATVS
RVVIDEEESRIEVVVPDDQLSLAIGRRGQNVRLASSLTGSAIDIMTEAEASEKRQKEFSE
RSKTFEEELDVDETLSQLLVAEGFSELEEVAYIDISELAGIEGFDEELAAELQNRALEAL
ERREEGQREERRALGVDDALAELPHLTEAMLVTLGKAGIKTLDDLADLATDELIAKKRNN
DQRRRNDRRERDRSERSEDKGGVLGEYGLSDEQGNEIIMAARAHWFDDEPMDDEAPATEE
AADAESSQ
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggccagtgcgatttccgccaaccgtgccgagctgctggcgattgccaacgcggtcgct
gccgaaaagatgatcgacaagtccatcgtgatcgaagcgatggaagaagcgatccagaag
tcggcgcgcaaccgctatggcgccgagaacgacattcgcgccaagctcgatccgcgcacc
ggtgacttgcgcctgtggcgcgtggtcgaagtggtcgagcacgtcgaagactacttcaag
caggttgacctcaagcaggccgaaaagctccaggccggcgccaaggtgggtgactttatc
gtcgatccgctgccgccggtggacctcggccgcatcgatgcgcagtcggccaagcaggtc
atcttccagaaggtgcgcgatgccgagcgcgatcgccagtatgacgaattcaaggaccgc
gccggcgaaatcatcaccggcgtgatcaagtcggtcgaattcggccacgtgatcgtcaac
ctgggccgcgccgaaggcgtgatccgccgcgaccagcagatcccgcgcgaagtgccgcgc
gttggcgagcgcgtgcgcgcgctgatcctcaaggtggagcgccagaaccgcggtccgcag
atcttcctgagccgcgcacatcccgacttcatgaagaagctgttcgcccaggaagtgccc
gaaatctatgacggcatcatcgagatcaaggccgcagcccgcgatccgggcagccgcgcc
aagatcggcgtgatcagccgtgacagctcgatcgacccggtcggcgcctgcgtcggcatg
aagggcagccgcgttcaggcggtggtccaggaaatgcagggcgaaaagatcgacatcatc
ccctggagcgaagacaccgcgacgttcgtggtcaacgcgctgcagcccgcgacggtcagc
cgcgtggtgatcgacgaggaagaaagccgcatcgaagtggtcgtgcccgacgaccagctg
agcctggcgatcggtcgccgtggccagaacgtgcgcctggcatcctcgctcaccggttcg
gccatcgacatcatgaccgaggccgaggcgagcgaaaagcgccagaaggaattctccgaa
cggtccaagaccttcgaggaagaactcgacgttgatgaaaccctgtcgcagctgctggtg
gccgaaggcttcagcgagctggaggaagtggcctacatcgacatcagcgaactcgccggg
atcgaagggttcgacgaggaactggcagccgagctgcagaaccgcgcgctcgaagcgctg
gaacgccgcgaggaaggccagcgcgaagaacgccgcgccctgggcgtggacgatgccctg
gccgaactgccgcacctgaccgaagccatgctggttacgctgggcaaggcggggatcaag
acgctggacgacctggcggatctcgctaccgacgaactgatcgccaagaagcgcaacaac
gaccagcgccgccgcaacgaccgccgcgagcgcgatcgttcggaacgcagcgaagacaag
ggcggcgtgctgggcgaatatggcctgagcgacgaacagggcaacgaaatcatcatggcg
gcacgcgcccactggttcgacgacgaaccgatggacgacgaagcccccgcaaccgaggag
gccgccgatgcggaatcctcacaatga
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