Novosphingobium capsulatum: U0041_10100
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Entry
U0041_10100 CDS
T10206
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ncp Novosphingobium capsulatum
Brite
KEGG Orthology (KO) [BR:
ncp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ncp03016
]
U0041_10100 (truB)
Enzymes [BR:
ncp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
U0041_10100 (truB)
Transfer RNA biogenesis [BR:
ncp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
U0041_10100 (truB)
Prokaryotic type
U0041_10100 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
WQD91375
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All DBs
Position
2199149..2200048
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AA seq
299 aa
AA seq
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MADGWIILDKPLTLGSTQGVAAVKRNLRARGLGKCKVGHGGTLDPLATGVLPIAVGEATK
LCGRMLDAHKAYAFTVAFGAETDTLDLEGAVIGHSTVRPTRAALDAALAAFTGPIAQVPP
AYSALKVDGERAYDLARAGHDVVLAARNVTIHALRVLETQGSDAALDSATLEADVSKGTY
IRSLARDIALALGTRGHVTMLRRLKAGPFTLDQAISLDKLNDWGQGAALENVILPVEAGL
VDIPALDLNPEQAGAVRQGRVLSGLPFPDGLWWARCGGKPVALVMLAGGALRVERGFNL
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggcagatggctggatcattctcgacaagccgctgaccctgggatcgacccagggtgtg
gcggcggtgaagcggaacctgcgtgcgcgcggtcttggcaagtgcaaggtgggccatggc
ggcacgctcgatcccctggccactggcgtgctgccgatcgccgtgggcgaggcaaccaag
ctgtgcgggcgcatgctcgatgcgcataaagcctatgccttcaccgtggcctttggcgca
gaaaccgatacgctcgatctggaaggggcggtaatcggccacagtacggtgcggcccacc
cgcgccgcgctcgatgcggcgttggcggcctttaccgggccgattgcccaggtgccgccg
gcctattccgcgctcaaggtcgatggcgagcgcgcctatgacctggcgcgcgccgggcat
gacgtggtcttggccgcccgcaacgtgaccatccatgcgctgcgcgtgctggaaacccag
ggcagcgacgcggcgctggacagtgccacgctggaggccgatgtatccaagggcacctat
atccgcagcctggcgcgcgacatcgccctggcccttggcacgcgcggccatgttaccatg
ctgcgccgtctcaaggccgggccgttcaccctggatcaggcgatttcgctggacaaattg
aacgattggggccaaggcgcggcccttgagaacgtaatcttgcctgtggaggcagggctg
gtcgacatcccggctcttgacctcaaccccgaacaggccggggcggtccgccagggccgc
gttctttcggggttgccctttcctgacgggctatggtgggcgcggtgcggcggcaagccg
gtcgcgctggtcatgctggcaggtggcgccttgcgcgttgaacggggtttcaacctttga
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