Novosphingobium capsulatum: U0041_11425
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Entry
U0041_11425 CDS
T10206
Name
(GenBank) response regulator transcription factor
KO
K07666
two-component system, OmpR family, response regulator QseB
Organism
ncp Novosphingobium capsulatum
Pathway
ncp02020
Two-component system
ncp02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ncp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
U0041_11425
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
U0041_11425
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
ncp02022
]
U0041_11425
Two-component system [BR:
ncp02022
]
OmpR family
QseC-QseB (quorum sensing)
U0041_11425
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
Motif
Other DBs
NCBI-ProteinID:
WQD91624
LinkDB
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Position
2508132..2508803
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AA seq
223 aa
AA seq
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MSLVLLVEDDAGIGRAIVQGLGGRGLGVRWLRQGADVLDALVREQMATVILDIGLPDADG
MVLCRQIRDAGHAMPILMLTARTALDDRLEGFDAGADDYLAKPFAFAELAARVGVLVRRA
GQLLPPPITWQGLSIDRAAGTAAWHGTPLALEPRSLALLAELALARGEVVERTALIDRVW
GADAVITDNAVDVAVSALRKRLGPCGLGIAAVRGRGFRLTLPE
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgagcttggtcctgctggtggaagacgatgccggcattggccgggcgatcgtccagggc
ctgggcggccgcggtcttggcgtgcggtggctgcgccagggggcggacgtgctcgacgcc
ctggtgcgcgagcagatggccacggtcattctcgatatcggcctgcccgatgccgatggc
atggtgctgtgccgccagattcgcgacgccgggcatgccatgccgatcctgatgctcacg
gcgcgcacggcgcttgatgatcggctggaaggctttgatgcaggcgccgatgattacctg
gccaagccctttgcctttgccgaactggccgcccgggtgggcgtgctggtgcgccgcgcc
gggcaattgctgccgccgccgatcacctggcagggcctttccatcgatcgcgccgccggc
acagccgcatggcacggcaccccgctggcgctggagccgcgcagcctggcgctgctggcc
gaactggcgctggcacggggtgaggtggtggagcggaccgcgctgatcgatcgggtgtgg
ggcgccgacgcggtgatcaccgacaacgccgtcgatgtggcggtcagtgcgctgcgcaag
cggcttggcccctgcggcttgggcattgccgccgttcgcggccggggttttcgcctgact
ttgccggaatag
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