Novosphingobium capsulatum: U0041_13270
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Entry
U0041_13270 CDS
T10206
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
ncp Novosphingobium capsulatum
Brite
KEGG Orthology (KO) [BR:
ncp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ncp02000
]
U0041_13270
Transporters [BR:
ncp02000
]
Other transporters
Pores ion channels [TC:
1
]
U0041_13270
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
WQD91961
LinkDB
All DBs
Position
complement(2917790..2920213)
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AA seq
807 aa
AA seq
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MSIFHATRPATGLGALLLASTALALPSLAQAAETAAAPAEQAPAPVADPASPDVPDANAI
TVTARHREERLQDVPLAISAISGAELTAKRIERVSEFALRVPNFGALQQNTRVSGLYIRG
LGGNASNDGAEGGVGLIVDNVFFTHVGFSWLDFVDLENIQVVRGPQGTLLGKNTTIGAVI
VQTAKPQFEPSYTLQATYGNYDAVQLRANATGPIIDDKLAYRLTFAESKGGGWITNAYNG
VKLLGNDRWSARGQLLFTPSATVSSRLIAEHYESNEYNNFYPPVADVTQNLNLDGTVNSP
RAGSWSAKLARFGYTPNLNGPYNANLNNQDRLIAKTDGLSNEINWDLGGVNLTGVTAWRR
LYFRPYNDSDYTPLDIYRAGYDVDVNQYSQELRLASAKGSTIDWQVGAFYLHEKLRSNLR
TIFGSDASTFFLGAGVPSSFIDGLEYDRDGRLTIDSLAGFGQVTAHLTSTFSLTGGLRYT
WEKKQVNIAGYALGTGALNPAGATARQALLNNLGGTSGSAAGAYTLANQVSRGSLAWLVN
PAWQVTPNVLLYASASHGEKSGAANTSATASQAALVITRPEKSTDFEAGIKTSWAGGKAT
VNLNLYNNTITDYQGTRVDQANASFGTYLANVGKVRLRGFEFEATWRPVRALGFNANLAY
NDAKYLDYADAPAPLEFQLANGGAARPLSLTGYQVAGSNKWTVQGGIDLDQPIGGEWNLT
GYANTSWKSRIAYINPRSVYGWQAPVAITNVGLGLRTQDNRWQLQAWAKNVTNERYAVSY
GAASASAPVIEVYGNPRTFGGTITRTF
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgtcgattttccatgccacccgcccggccacgggcctgggcgccctgctgctcgcctcc
accgcactggctttgccaagcctggcccaggcagccgaaactgcggcggcgccggccgaa
caggcgccggcaccggtcgccgacccagccagcccggatgtgcccgatgccaatgccatc
actgtcacggcccgccaccgcgaagaacggctgcaggatgtgccgctggccatctcggcc
atttccggcgcggaactgactgccaagcggatcgagcgggtaagcgaatttgccctgcgc
gtgcccaatttcggcgcgctgcaacagaatacccgcgtttccggcctctacattcgcggg
ctgggcggcaatgccagcaacgatggcgccgaaggcggcgttggcctgatcgtggacaac
gtgttcttcacccacgtgggcttttcctggctcgatttcgtcgacctggaaaacatccag
gtggtgcgcgggccgcagggcacgctgctgggcaagaacaccacgatcggcgcagtgatc
gtgcagacggccaagccccagttcgagccttcctatacgctgcaagccacctatgggaat
tacgatgcggtgcagctgcgcgccaatgccaccgggccgatcatcgatgacaagctggcc
tatcggctgacctttgccgaaagcaagggcggcggctggatcaccaacgcctataacggc
gtcaagctgctgggcaacgatcgctggtcggcgcgcgggcaactgctgttcacgcccagc
gccactgtgtcctcacgcctgatcgccgaacattacgaatccaacgaatacaacaatttc
tacccgccagtggcggacgtgacacagaacctgaacctggatggcacggtcaattcgccg
cgcgccggtagctggagcgccaagctggcgcggtttggctatacccccaatctcaacggg
ccctacaacgccaacctcaacaaccaggatcgcctgatcgccaagaccgatggtctttcc
aacgagatcaactgggatctgggcggtgtgaacctgaccggcgttaccgcatggcggcgg
ctctatttccggccctacaacgatagcgactacaccccgctggatatctaccgtgcgggc
tatgatgttgacgtcaatcagtattcgcaggaactgcggctcgcctcggccaagggcagc
acgatcgattggcaggtgggcgcgttttacctgcacgaaaagctgcgcagcaacttgcgc
acgatcttcggatcagacgcctcgacgtttttcctgggggcaggggtgccgtcctcgttc
atcgacgggctggagtatgaccgcgacggccggttgacgatcgacagcctggccggcttt
ggccaggtgaccgcgcatctcacctccacgttctcgctcaccggcggcctgcgctacacc
tgggagaagaagcaggtgaatattgccggctatgccctgggcaccggcgcgctcaatccc
gctggcgccacggcgcggcaggcgctgctcaacaacctgggcgggacgagcggcagcgcg
gccggcgcctatacgctggccaaccaggtcagccgtggctcgctggcctggctggtcaat
ccggcgtggcaggtgacgcccaacgtgctgctctatgcctcggccagccatggcgaaaaa
tcgggcgcggccaatacttcggccacggcgagccaggccgcgctggtgatcacccggccg
gaaaagtccaccgatttcgaggccgggatcaagaccagttgggccggcggcaaggccacc
gtcaacctcaacctctacaacaacacgatcaccgattatcagggcacccgcgtcgaccag
gccaatgcctcgttcggcacctatctcgccaacgtgggcaaggtgcggctgcgcgggttc
gagttcgaggcgacgtggcgcccggtgcgggcgctggggttcaatgccaatcttgcctat
aacgacgccaagtacctggattatgccgatgcgcccgcgccgctggaattccagctggcc
aatggcggcgccgcgcggcccctgtcgctcaccggctatcaggtggccggttccaacaag
tggacggtgcagggcgggatcgatcttgatcagccgatcggtggggaatggaacctcacc
ggctatgccaacaccagctggaaaagccggattgcctacatcaacccgcgctcggtctat
ggctggcaggcgccggtagcgatcaccaacgtggggctgggcctgcgcacgcaggacaac
cgctggcagcttcaggcctgggccaagaacgtgaccaacgaacgctatgccgtctcctac
ggcgcggccagtgcctcggccccggtgatcgaggtctatggcaatccgcgcacgttcggc
ggcaccatcacgcggacgttttga
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