Novosphingobium capsulatum: U0041_13940
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Entry
U0041_13940 CDS
T10206
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
ncp Novosphingobium capsulatum
Pathway
ncp00550
Peptidoglycan biosynthesis
ncp01100
Metabolic pathways
ncp01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
ncp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
U0041_13940 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
U0041_13940 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ncp01011
]
U0041_13940 (mrdA)
Enzymes [BR:
ncp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
U0041_13940 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
ncp01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
U0041_13940 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
WQD92089
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All DBs
Position
3064991..3067075
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AA seq
694 aa
AA seq
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MKQKLPLTSAILTNRFERRTFVLGMAQASVGVLLATRLAYLAIFENDKYKAASESNRVNL
SLIPPRRGWVLDRNGAALASNRADFRVDVIPDRLVNPDDTLSKLSGLLGLTADKVSDIKD
KLDKVRGFQPVEVAAKLDWDKFAAVSVRLPEMPGVIPQRGYSRYYPTGPSVGHLVGYVGP
ASAEDYEREHNPLLITPGFKIGKDGLEKHFETRLRGVPGARRVEATATGRVVRDLGTRED
VPGQPIQLTILGGLQDYAARRIGLESGSVVVMDCATGDVLAMVSMPCYDPNSFSDGIGRI
EWKMLSEDDHVPLRNKVLRGLYPPGSTVKPLVALSFLEAGLDPKASVNCAGGLRVGNRVF
HCWNHHGHGQTDMLKGIYQSCDVYFYHFAQQIGMDKIAAMARRLGLGQEFPMPYPGQSYG
TVPDPAWKLRKYHKEWAIYDTVNATIGQGYMLVNPLQQATMVSRIASGLQLTPRLMLDKH
AAPPPSMGFAQEHLDLIHAAMNEVVNGRGTAGKARIPIDGVLMAGKTGTAQVVGLQHGNG
KNVEWKRRDHGHFICFAPFDKPRYACAVAIEHGGGSPSAYPIARDVMTYLFDPAKAMAAL
EELEKGWGGNVQQRMAARYNTFAAQYGASAPRAPDEAQASQVVEDENKPPAAPAAPQTDA
APPAPEPDAPQPQPTPSPASGGTQAGGAAPNGGQ
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcagaagctgccgttgacttcggcaatcctgaccaaccgctttgaacgccgcacg
ttcgtgctgggcatggcccaggccagcgtcggcgtgctgctggccacgcgcctggcctat
ctcgcgatcttcgagaacgacaagtacaaggcggcgtcggaaagcaaccgcgtcaacctg
tcgctgatcccgccgcggcgcggctgggtgctcgatcgcaatggcgccgcgctggcctcc
aaccgtgccgatttccgcgtcgacgtgatccccgatcgtctggtcaatcccgacgatacc
ctgtccaagctgtcgggcctgctcggactgacggcggacaaggtcagcgacatcaaggac
aagctcgacaaggtgcgcggattccagccggtggaagtggccgccaagctggactgggac
aagtttgccgcagtcagcgtgcgcctgcccgagatgcccggcgtgatcccgcagcgcggc
tattcgcgctattatcccaccgggccgtcggtggggcatctggtcggctatgtcggtccc
gcctcggccgaggattacgagcgcgaacacaatccgctgctcatcacaccgggtttcaag
atcggcaaggatggtcttgaaaagcatttcgaaacccgcctgcgcggggtgcctggcgcg
cgccgggtagaggccacggcaactggccgcgtggtgcgcgacctgggcacgcgcgaagac
gtgcccggccagccgatccagctgaccatcctgggcgggctgcaggactatgcggcgcgg
cgcattggcctggaatccggctcggtcgtggtaatggactgcgccaccggtgacgtcctc
gcgatggtgtcgatgccgtgctacgatcccaacagcttttccgacggcatcggccgcatc
gaatggaagatgctgtcggaagacgatcacgtacccttgcgcaacaaggtgctgcgcggg
ctctatccgcccggctcgacggtcaagccgctggtcgcgctctcgttcctcgaggccggc
ctcgatcccaaggcctcggtcaactgcgccggggggctgcgcgtgggcaaccgcgtgttc
cactgctggaaccaccacggccacggccagacggacatgctcaagggcatctatcagtcg
tgcgacgtctatttctatcactttgcccagcagatcggcatggacaagatcgccgccatg
gcgcggcgcctgggactgggccaggaatttcccatgccctatcccggccaatcctatggc
acggtgcccgatcccgcgtggaagctgcgcaagtaccacaaggaatgggcgatctatgac
acggtgaatgccaccatcggccaaggctacatgctggtgaacccgctgcagcaggcaacg
atggtgtcgcgcatcgcctcgggcctgcaactcaccccgcgcctgatgctcgacaagcat
gccgcgcctccgccctcgatgggctttgcccaggaacaccttgatctcattcatgcggcg
atgaacgaagtggtcaacgggcgcggcacggcgggcaaggcacgcatcccgatcgatggc
gtgttgatggccggcaagaccggcacggcgcaggtcgttggcctgcaacacggcaatggc
aagaacgtggaatggaagcggcgcgaccatggccacttcatctgcttcgcgccgttcgac
aagccgcgctatgcctgcgccgtggcgatcgaacatggcggcggctcgcccagcgcctat
ccgatcgcacgtgacgtgatgacctatctgttcgatccggccaaggcgatggccgcgctg
gaggaactggaaaagggctggggcggcaacgtgcagcagcgcatggccgcccgctacaac
acgtttgccgcgcaatatggcgccagtgccccgcgggcgcccgacgaggcgcaggcaagc
caggtggtggaagacgaaaacaagccgcccgccgcgccggccgcgccgcaaaccgacgct
gcgcccccggcgcccgaacccgatgcgccccagccgcagccaacgccgagcccggcctct
ggcggcacccaggcgggcggtgccgcgcccaacggggggcagtga
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