Novosphingobium capsulatum: U0041_14035
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Entry
U0041_14035 CDS
T10206
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
ncp Novosphingobium capsulatum
Pathway
ncp00220
Arginine biosynthesis
ncp00240
Pyrimidine metabolism
ncp00250
Alanine, aspartate and glutamate metabolism
ncp01100
Metabolic pathways
ncp01110
Biosynthesis of secondary metabolites
ncp01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
ncp00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
U0041_14035 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
U0041_14035 (carB)
00220 Arginine biosynthesis
U0041_14035 (carB)
Enzymes [BR:
ncp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
U0041_14035 (carB)
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Paralog
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Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp
ATPgrasp_Ter
ATP-grasp_3
ATP-grasp_4
ATP-grasp_5
CoA_binding_2
ADH_zinc_N
GSH-S_ATP
Motif
Other DBs
NCBI-ProteinID:
WQD92104
LinkDB
All DBs
Position
complement(3081376..3084690)
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AA seq
1104 aa
AA seq
DB search
MPKRTDISSILIIGAGPIIIGQACEFDYSGTQAVKALKEEGYRIILVNSNPATIMTDPEM
ADATYVEPITPEVVAKIIAKERPDAVLPTMGGQTALNTALALANDGTLEKYGVTMIGANA
EAIDKAEDRQKFRDAMDKIGLESARSGVAHTVEEALAVLETTGLPSIIRPSFTLGGTGGG
IAYNKDEFIKIVRGGLEASPTTEVLIEESLLGWKEYEMEVVRDRNDNCIIICSIENVDPM
GVHTGDSITVAPALTLTDKEYQIMRNASIAVLREIGVETGGSNVQFAVNPKDGRLIVIEM
NPRVSRSSALASKATGFPIAKVAAKLAVGYTLDEITNDITGATPASFEPTIDYVVTKIPR
FAFEKFKGSEPLLSTAMKSVGEVMAIGRNLKESLQKALRGLETGLDGFNRYDALEGATRD
EINAALSRATPERLLVAGQAFREGFSVEDVHAVTKYEPWFLRHIAEIIAEEEAVIQHGLP
VTAEGMRRLKGMGFSDKRLAKLAVRSAGLVGSPNHARSGLVHDVVSAMAGATSEAEVRKL
RHKLGVRPVFKRIDSCAAEFEAVTPYMYSTYEGGLFGEPENEAMPSDRRKIVILGGGPNR
IGQGIEFDYCCCHACFALEDAGFETIMVNCNPETVSTDYDTSDRLYFEPLTAEDVLEILD
VERSTGELVGVIVQFGGQTPLKLAQALEDAGIPILGTSPDAIDLAEDRERFAALVEQLGL
KQPANGIARSRDEAIAVASRIGYPVLIRPSYVLGGRAMEIVDSQAQLEDYIATAVQVSGD
SPVLIDQYLRDAIECDVDALADGETVRVAGVLQHIEEAGIHSGDSACTLPPYNLPAEIVA
EMERQAVLLAQALQVRGLMNIQFAVKDGDVYLIEVNPRASRTVPFVAKAVGQPIAKYAAR
VMAGERLADLPEIRRDIDYMAVKEAVFPFARFPGVDPVLSPEMKSTGEVMGIDDNFGMAF
AKAQLGASTRLPQGGTLFVSVKDTDKPVVLPGVRKLAAMGFKIVATGGTARYLADNGVNV
EQVNKVAEGRPHIVDRIIDGEIALIFNTTEGWQSHKDSASIRASALNGRVPYFTTATASV
AAAEAIEALRSAELEVKSLQDYYR
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagcgcactgacatctcctcgatcctgatcatcggcgccgggccgatcatcatc
ggccaggcttgcgagttcgactattcgggcacgcaggcggtcaaggcgctcaaggaagag
ggctatcgcatcatcctggtcaattccaacccggccacgatcatgaccgacccggaaatg
gccgacgccacctatgtggagccgatcacgcccgaagtggtggccaagatcatcgccaag
gaacggcccgatgccgtgctgccgacgatgggcgggcagaccgcgctcaacacggcgctg
gccctggccaatgacggcacgctggaaaagtatggcgtgacgatgatcggcgccaacgcc
gaggcgatcgacaaggccgaagaccgccagaagttccgcgacgcgatggacaagatcggg
ctggaatcggcccggtcgggcgtggcccacacggtggaagaagcgctggccgtgctcgaa
accaccggcctgccttcgatcatccgccccagctttaccctgggcggcaccggcggcggt
attgcctataacaaggacgagttcatcaagatcgtccgtggcggcctggaagcatcgccc
accaccgaagtcctgatcgaggaatcgctcctcggctggaaggaatacgagatggaagtc
gtccgtgaccggaacgacaattgcatcatcatctgctcgatcgaaaacgtcgatccgatg
ggcgtgcacaccggcgactccatcaccgtggccccggcgctgacgctgaccgacaaggaa
taccagatcatgcgcaatgcatcgatcgcggtgcttcgcgagatcggcgtggaaaccggc
ggttccaacgtgcagttcgcggtcaaccccaaggatgggcgcctgatcgtgatcgagatg
aacccgcgcgtctcgcgctcctcggcgctggcgtcgaaggccaccggcttcccgatcgcc
aaggtcgcggccaagctggcggtgggctataccctcgacgagatcaccaacgacatcacc
ggcgccacgccggcgagctttgaaccgacgatcgactatgtcgtcaccaagatcccgcgc
tttgcctttgaaaagttcaagggttccgaaccgctgctctccacggcgatgaagtcggtc
ggcgaagtcatggcgatcggccgcaacctcaaggaatcgctgcagaaggcgctgcgcggc
ctggaaaccggcctcgatggcttcaaccgctatgatgcgctcgaaggcgccacgcgcgac
gagatcaacgccgcgctcagccgcgccacgcccgagcgcctgctcgtggccggccaggcc
ttccgcgaaggcttcagcgtcgaagacgtccacgccgtgaccaagtacgaaccctggttc
ctgcgccacatcgccgaaatcatcgccgaggaagaagcggtgatccagcacggcctgccc
gtgacggccgaaggcatgcgccggttgaagggcatgggcttttccgacaagcgcctggcc
aagctggcggtgcgctcggccgggctggtcggcagccccaaccatgcgcgttcgggcctg
gtgcacgatgtggtttcggccatggccggcgccaccagcgaggccgaagtgcgcaagctg
cgccacaagctgggcgtgcgcccggtgttcaagcgcattgacagctgcgccgccgaattc
gaagcggtcacgccctacatgtattccacctatgaaggtggcctgtttggcgagcccgaa
aacgaggcgatgcccagcgaccgccgcaagatcgtgatcttgggtggcggtcccaaccgc
atcggccagggcatcgagttcgactattgctgctgccacgcctgcttcgcgctggaagac
gccgggttcgagaccatcatggtcaactgcaacccggaaaccgtttccaccgactatgac
acctcggaccgcctctatttcgagccgctgacggccgaagacgtgctggaaatccttgat
gtcgagcgctccaccggggaactggtcggcgtgatcgtgcagtttggcgggcagaccccg
ctcaagctggcgcaggcgctggaagacgccggcatcccgatcctgggcacctcgcccgac
gcgatcgacctggccgaagaccgcgagcgctttgccgcgctggttgagcagctgggcctc
aaacagccggccaatggcatcgcccgcagccgcgacgaagccatcgctgtggccagccgc
atcggctatcccgtgctgatccgccccagctatgtgctgggtggccgcgccatggaaatc
gtcgacagccaggcccagctggaagactacatcgccacggcggtgcaggtttccggcgat
agcccggtcctgatcgaccagtacctgcgcgatgcgatcgaatgcgatgtcgatgcgctg
gccgatggcgaaaccgtgcgcgtggccggtgtgctgcagcacatcgaggaagccggcatc
cattcgggtgacagcgcctgcaccctgccgccctacaacctgccggccgaaatcgttgcc
gaaatggagcgccaggcggttcttctggcccaggcgctgcaagtgcggggcctgatgaac
atccagttcgcggtcaaggatggcgacgtttacctgatcgaggtgaacccgcgcgccagc
cgcaccgtgccgtttgtggccaaggcggtggggcagcccattgccaagtatgccgcccgc
gtgatggccggcgaacgcctggccgatctgcccgaaattcgccgcgacatcgattacatg
gcggtcaaggaagcggtgttcccgtttgcgcgcttccccggcgtcgatccggtgctctcg
ccggaaatgaagtcgaccggcgaagtcatgggtatcgacgacaatttcgggatggctttc
gccaaggcgcagttgggcgccagcacccgcctgccgcagggcggcacgctgttcgtctcg
gtcaaggataccgacaagccagtggtcctgccgggcgtgcgcaagctggcggcgatgggc
ttcaagattgtcgccactggcggcactgcccgctatctggccgacaacggcgtgaacgtg
gaacaggtcaacaaggtggccgaaggccgcccgcacatcgtcgaccgcatcatcgatggc
gagattgcccttattttcaacacgaccgaaggctggcaaagccataaggactccgcttcg
atccgtgcgtcggcgctcaatggcagggttccctacttcaccacagccaccgcatcggtg
gctgcggcagaggcgatcgaggctttgcgcagtgccgaacttgaagtgaagtcactgcaa
gactattatcgttga
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