Novosphingobium capsulatum: U0041_14065
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Entry
U0041_14065 CDS
T10206
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
ncp Novosphingobium capsulatum
Brite
KEGG Orthology (KO) [BR:
ncp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ncp02000
]
U0041_14065
Transporters [BR:
ncp02000
]
Other transporters
Pores ion channels [TC:
1
]
U0041_14065
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Porin_2
Motif
Other DBs
NCBI-ProteinID:
WQD92110
LinkDB
All DBs
Position
3091340..3093652
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AA seq
770 aa
AA seq
DB search
MRTTRFASAMLAGAAFAAIAPAAFAQDAAPAAPAAAAADDAGNAIVVTAERRQENIMSVP
VSVAVMKPELLHNLQAAGADTLLSLAGRVPSLNVESTTGRIFPRFYIRGLGNIDFYLGAS
QPVSVIQDDVVMEHVVLKSNPAFDIAQVEVLRGPQGSLFGRNTTAGIVKFDTAQPTATWA
GQASASWGSRNSVNIDAGVGGPLTSDGRVSFRLSGLYQHRDNWINNTYTGVSDDGTKPGN
NVMGGFNERDVRLQLLAQPTETLSLRLSGHYRDYDGSASIFYRGSIQKGTHTVPQNLDLT
NVAYDEGGNNPQAYKTKGVSLKAVQDIGSMTLTSITAYEASHGSSRGDTDGGAAANFGGA
GFGESRGVLRSLNQWSQEVRLASPDAARFKWQLGGIYFDSRDYTEFDQRGYFLNAGAPGA
NPNNWVLLHNVNTSWAVFGQASYDLTEKLRFTAGARLSNDTKTTTLLKTADTAAGVVTFP
ATAPRNVRLSDTQPSFDASLLYRANSDLSFFARVARGFRGPTIQGRSAVFNSPFTTANSE
KNTSWEAGIKSAWLDNALTFNLTGFYYTVTDIQLNGNDSNGSGVLFNADKAVGYGAEAEV
GLRPSKNLRFDIGVSVLHTEVKDPNVFAQAGSAGGVLSETVLNPVNKVGANYFAQINGNS
LPNAPRFNLNLSGRYDLPLNDDFKAFVGADFNLQGYTMYVPYKTVEYTSDGNYELGAKAG
FAFGRYELAVFARNLTNKRNLVGVIDTSNYRAGIYNDPRTIGVSFSGSFR
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaccacccgtttcgcttccgccatgctggcgggggccgcctttgcggccatcgca
cctgccgcctttgcccaggatgctgcacccgctgcgcccgccgccgccgctgctgacgat
gccggcaatgccatcgtcgtgacggcagagcgccgccaggaaaacatcatgtcggtgccg
gtgtcggtggccgtgatgaagcccgaactgctgcacaaccttcaggccgccggcgctgac
acgctgctctcgctcgctggccgcgtgcccagcctcaacgtcgaatcgaccacgggccgc
atcttcccgcgcttctacatccgcggccttggcaacatcgacttctacctcggcgcttcg
cagccggtgtcggtgatccaggacgacgtggtgatggagcacgtggtgctcaagtccaac
ccggcgttcgacatcgcccaggtggaagtgctgcgcggcccgcagggttcgctgttcggc
cgcaacaccacggccggtatcgtcaagttcgacaccgcccagcccaccgcaacctgggcc
ggccaggccagcgccagctggggcagccgcaacagcgtgaacatcgacgccggcgtcggt
ggtccgctgacttctgacggccgcgtcagcttccgcctgtcgggcctgtaccagcaccgc
gacaactggatcaacaacacctacaccggcgtcagcgacgacggcaccaagcccggcaac
aacgtcatgggcggattcaacgagcgcgacgtgcgcctgcagctgctggcccagccgacc
gaaaccctgtcgctgcgcctgtcgggccactatcgcgattacgacggcagcgcctcgatc
ttctaccgcggttcgatccagaagggcacgcacaccgtgccgcagaacctggacctgacc
aacgtggcctatgacgaaggcggcaacaacccgcaggcctacaagaccaagggcgtctcg
ctcaaggccgtgcaggacatcggcagcatgacgctgacctcgatcacggcctatgaagcg
tcgcacggttcgagccggggtgacaccgacggcggtgcggcggccaacttcggcggcgcc
ggctttggcgaatcgcgcggcgtgctgcgcagcctcaaccagtggagccaggaagtgcgc
ctggcgagccccgacgcggcccgtttcaagtggcagctcggcggcatctacttcgactcg
cgcgattacaccgagttcgaccagcgcggctacttcctcaacgctggcgcgccgggtgca
aaccccaacaactgggtgctgctgcacaacgtcaacaccagctgggcggtgtttggccag
gccagctatgacctgaccgaaaagctgcgcttcaccgccggcgcgcgcctgtccaacgac
accaagaccaccaccctgctcaagacggccgatacggccgccggcgtggtgaccttcccg
gccacggcaccgcgcaacgtgcgcctgtcggacacgcagccgagctttgacgccagcctg
ctctatcgcgccaattccgacctgtcgttctttgcccgcgtggcgcgcggcttccgtggc
ccgacgatccagggtcgctcggccgtgttcaattcgccgttcaccacggccaattcggaa
aagaacacctcgtgggaagccggcatcaagagcgcctggctggataacgcgctgacgttc
aacctcaccgggttctactacaccgtcaccgacatccagttgaacggcaacgacagcaat
ggcagcggcgtgctgttcaatgccgacaaggccgtgggctatggcgccgaagcggaagtg
ggcctgcgtccgtcgaagaacctgcgcttcgacattggcgtgagcgtgctgcacaccgag
gtcaaggaccccaacgtgtttgcccaggccggttcggctggtggcgtgctgtcggaaacc
gtgctcaacccggtcaacaaggtcggcgcgaactactttgcgcagatcaacggcaattcg
ctgcccaacgcgccgcgcttcaacctcaacctgtcgggccggtacgacctgccgctgaac
gacgacttcaaggcgttcgtcggcgcagacttcaacctgcagggctataccatgtacgtg
ccctacaagacggtggaatacacctctgacggcaactacgagctgggcgccaaggccggc
ttcgcgtttggtcgctacgagttggcggtgttcgcccgcaacctgacgaacaagcgcaac
ctggtcggcgtgatcgacacctccaactatcgcgccgggatctacaacgatccgcgcacg
atcggtgtctcgttcagcggttcgttccgctga
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