Novosphingobium capsulatum: U0041_14730
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Entry
U0041_14730 CDS
T10206
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ncp Novosphingobium capsulatum
Pathway
ncp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ncp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
U0041_14730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncp03400
]
U0041_14730
Enzymes [BR:
ncp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
U0041_14730
DNA repair and recombination proteins [BR:
ncp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
U0041_14730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_C
DEAD
PriA_3primeBD
ResIII
Zn_ribbon_PriA
Helicase_C
AAA_30
AAA_22
Zn_ribbon_6
AAA_19
zf_Rg
ETF
MerR_1
HTH_5
DAP3
Motif
Other DBs
NCBI-ProteinID:
WQD92236
LinkDB
All DBs
Position
3233008..3235200
Genome browser
AA seq
730 aa
AA seq
DB search
MSQPPPRSQSRRIRCVVFNAALGPLDYKVPAHLDVVPGQVVVCPLGPRQILGVVWEEERL
PSADVPEHKLRPILGVVPVPPLGAPLRRLIEWCADYYMAPLSAVARMALSSTAALQGGST
VTEYRLSGREPGRLTPQRAQAMDLLIDQQATIRELAEIAEVSDGVLRGMVNAGLLEPVTV
DADRPYPAADPRHAVPELTPTQAQVAGRLVEAVSARRFVTFLLDGVTGSGKTETYAEAIA
AALEQGRQVLVLLPEIALTQSFLARFEARFGVEPVTWHSSLKSSERRRAWRAVAQGHAQV
VVGARSALFLPFAALGLIVVDEAHEVSFKQDDGVRYNARDVAVMRGHFESIPVVLASATP
ALESLHMAASGRYERLVLPSRFGGAGLPDIRILDLREQAPERGHWLAPPLVEGLRERLAK
GEQSLLFLNRRGYAPLTLCRTCGYRFQCPNCSAWLVEHRLSQRLACHHCGHEVPTPRACP
ECGEPDCLVACGPGVERIADEVATILPEARVALVTSDTLTSAAKAAEFVAQAENKAIDVI
VGTQLVTKGYHFPDLTLVGVVDADMGLEGGDLRAAERTYQQVAQVAGRAGRGEKPGEVLI
QTRHPDAPVIAALASGDRDAFYAAETEARREAHAPPFGRWAAIIVSSEDEAEARDAARAI
GGTAPRLDDVMILGPAPAPLSLLRGRYRYRLLVNARRSSEVQKVIRQWLEPFRFPQGVRV
AVDIDPYSFV
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgagccagcccccgccgcgcagccaatcccgccgcatccgatgcgtggtgttcaacgcc
gcgctggggccgctcgactacaaggtgcccgcgcatctcgatgtggtgccgggccaggtg
gtggtctgcccgctggggccgcgtcagatcctgggcgtggtgtgggaggaagagcgcctg
cccagcgccgacgtgccggaacacaagctgcgcccgatcctgggcgtggtgccggtgccg
ccgctcggcgcgcccctgcgccgcctgatcgaatggtgcgccgattactacatggccccg
ctttccgccgtggcgcgcatggcgctgtcgagcacggcggcgctgcaaggcggcagcacg
gtgaccgaataccgcctgtccgggcgcgagccgggccggctgacaccgcagcgcgcgcag
gcgatggacctgctgatcgaccagcaggcgacgatccgcgaactggccgaaattgccgag
gtttccgacggggtgctgcgcggcatggtcaatgccggcttgctcgaacccgtcacggtc
gatgccgaccggccctaccccgccgccgatccgcgacatgccgtgccggaattgaccccc
acccaagcgcaggtcgccgggcggctggtagaggccgtgtcggcgcggcgctttgtcacg
ttcctgctcgacggggtgaccggatcgggcaagaccgagacttatgccgaggcaattgcc
gccgcgctggaacaggggcgccaggtgctggtgctgctgcccgaaatcgccctgacgcaa
agtttcctggcccggttcgaggcgcgtttcggcgtggagccggtcacctggcattcctcg
ctcaaatcgtcggaacggcgccgcgcctggcgcgcggtggcgcagggccacgcccaggtg
gtggtgggcgcgcgctcggcgctgttcttgccctttgccgcgctgggcctgatcgtggtg
gacgaagcccacgaggtttcgttcaagcaggacgatggcgtgcgttacaacgcgcgtgac
gtggcggtgatgcgcggacatttcgaaagcatcccggtggtgctggccagcgccaccccc
gcgctggaaagcctgcatatggccgcgagcgggcgttatgaacggctggtgctgcccagc
cggttcggcggcgccggcctgcccgatatccgcattctcgacttgcgcgaacaagcgccg
gaacgcggccactggctcgccccaccgctggtggagggcctgcgcgagcgcctggccaaa
ggcgagcagagcctgctgtttctcaaccggcgcggctatgccccgctgacgctgtgccgc
acctgcggctatcgcttccagtgccccaattgctcggcctggctggtcgaacaccgcctg
tcgcagcgcctcgcctgccatcactgtgggcacgaggtgccaacgccccgcgcctgcccc
gaatgtggcgagcccgattgcctggtcgcctgcggcccgggggtggagcgcattgccgat
gaagtggcgacgatcctgcccgaggcacgcgtggcgcttgtcacttcggacacgttgacg
agtgcggccaaggcggccgaattcgtggcccaggcagagaacaaggccatcgacgtgatc
gtgggaacgcaactggtaacaaagggctatcacttccccgacctgaccctggtgggcgtg
gtcgatgccgacatgggcctggaagggggcgacttgcgcgccgccgagcgcacctatcaa
caggtggcgcaggttgccgggcgcgccggacgcggggaaaagcctggcgaagtgctgatc
cagacgcgccatcccgatgccccggtgatcgccgcgctggccagtggcgatcgcgacgcg
ttctatgccgccgaaaccgaggccaggcgcgaggcccatgccccgccgttcggccgctgg
gctgcgatcatcgtgtcgagcgaggacgaggccgaagcgcgcgacgcggcccgcgccatc
ggtggcaccgcgccgcgcctcgacgatgtgatgatcctagggcccgcgcccgccccgcta
tcgctgctgcgtgggcgctatcgctatcgcctgctggtcaatgctcgccggtcgagcgag
gtgcaaaaggtgatccgccagtggctggagccattccgctttccccaaggggtaagggtg
gcggtggatatcgatccctacagcttcgtttga
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