Novosphingobium capsulatum: U0041_15935
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Entry
U0041_15935 CDS
T10206
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
ncp Novosphingobium capsulatum
Pathway
ncp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ncp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
U0041_15935 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ncp01007
]
U0041_15935 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ncp03016
]
U0041_15935 (aspS)
03029 Mitochondrial biogenesis [BR:
ncp03029
]
U0041_15935 (aspS)
Enzymes [BR:
ncp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
U0041_15935 (aspS)
Amino acid related enzymes [BR:
ncp01007
]
Aminoacyl-tRNA synthetase
Class II (A)
U0041_15935 (aspS)
Transfer RNA biogenesis [BR:
ncp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
U0041_15935 (aspS)
Prokaryotic type
Other AARSs
U0041_15935 (aspS)
Mitochondrial biogenesis [BR:
ncp03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
U0041_15935 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
GAD
Motif
Other DBs
NCBI-ProteinID:
WQD92465
LinkDB
All DBs
Position
complement(3515187..3516968)
Genome browser
AA seq
593 aa
AA seq
DB search
MHPYRSHTCGALSREHVGENVRLSGWVHRKRDHGGVLFVDLRDHYGITQIVADSDSPALP
LLESVRVESVVTIEGVVKARNEATVNANLATGAIEVFAKVATVLSAAEELPMPVAGEQEY
PEDIRLRYRFLDLRRETLHANIVTRTRIISDMRRRMEGAGFTEYSTPILTASSPEGARDF
LVPSRIHAGKFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE
MSFVTQEEVWETMEPVIGGVFEAFAEGKPVTPIGQFPRIPYDEAILKYGSDKPDLRNPLL
ITDVSHHFTQSGFGLFEKIVGTGGVVRAIPAPNTADKSRKFFDEMNDWARAEGHAGLGYV
TRKGGEFGGPIAKNHGAEGMAALYAELGLGENDGLFFAAGKADQAAKLAGLARNRVAAQL
GLVEEGTYKLCWIVDFPFYEWDEDNKKVEFSHNPFSMPQGGMDALTNQDPLTIKAFQYDL
VCNGYEIASGSIRNQSPETMVKAFEIVGLTKADVEERFGGLYRAFQYGAPPHGGMAAGVD
RIVMLLCGAQNLREITLFPMNQRAEDLLMGAPSPAEHKQLRELNIRVVEQPKG
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgcatccttaccgttcccacacctgcggcgccctctcgcgcgagcatgtcggcgaaaat
gttcgcctttcgggctgggtgcatcgcaagcgcgaccatggcggcgtgctgttcgtcgat
ttgcgcgatcactacgggatcacccagatcgtggcagatagcgacagcccggcgctgccg
ctgctcgaatccgtgcgcgtggaaagcgttgtgacgatcgaaggcgtggtcaaggcccgc
aacgaagcgaccgtcaacgccaacctggcgacgggcgcgatcgaagtgttcgccaaggtg
gcgacggtgctttcggcggcagaagagctgcccatgccggtggccggcgagcaggaatat
cccgaggatatccgcctgcgctatcgcttcctcgatctgcgccgcgaaaccctgcacgcc
aacatcgtgacgcgcacgcgaatcatctccgacatgcgccgccgcatggaaggcgcgggc
ttcaccgaatattccacgccgatcctgacggcatcgagcccggaaggcgcgcgcgacttc
ctggtgccgagccgcatccacgccggcaagttctatgcgttgccgcaggcgccgcagcag
tacaagcagctgctgatggtggccgggttcgaccgctatttccagatcgcgccgtgcttc
cgcgacgaagatccgcgcgccgatcgcctgccgggcgaattctaccagctcgacctggaa
atgagctttgtgacccaggaagaagtctgggaaacgatggagccggtgatcggcggcgtg
ttcgaggcctttgccgaaggcaagccggtgacgccgattggccagttcccgcgcattccc
tatgacgaggcgatcctcaagtacgggtctgacaagccggacctgcgcaacccgctgctg
atcaccgacgtttcgcaccacttcacccagtccggctttggcctgtttgaaaagatcgtc
ggcaccggcggcgtcgtccgcgccattccggcgccgaacaccgcagacaagagccgcaag
ttctttgacgaaatgaacgactgggcccgcgccgaaggccatgctggcctgggctatgtc
acccgcaagggcggcgagtttggcgggccgattgccaagaatcacggcgccgaaggcatg
gccgcgctctatgccgagctgggcctgggcgaaaacgacgggctgttctttgccgctggc
aaggccgatcaggccgccaagctggcgggcctggctcgcaaccgcgtggccgcgcagctt
ggcctggtcgaagaaggcacctacaagctgtgctggatcgtcgatttcccgttctatgaa
tgggatgaagacaacaagaaggtggaattcagccacaacccgttctccatgccgcagggc
gggatggacgcgctgaccaaccaggacccgctgacgatcaaggcgttccagtacgatctg
gtctgcaacggctatgaaatcgcctcgggctcgatccgcaaccagtcgcccgaaaccatg
gtcaaggcgttcgaaatcgtgggcctgaccaaggctgacgtggaagagcgctttggcggc
ctctatcgtgcgttccagtatggcgcgccgccccacggcggcatggccgctggtgtcgac
cgcattgtcatgctgctgtgcggggcgcagaacctgcgcgagatcacgctgttcccgatg
aaccagcgggccgaagacctgctgatgggggcgccctcgccagccgagcacaagcagttg
cgcgagctcaacattcgcgttgtcgaacagcccaagggctga
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