Novosphingobium capsulatum: U0041_18025
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Entry
U0041_18025 CDS
T10206
Symbol
gabT
Name
(GenBank) 4-aminobutyrate--2-oxoglutarate transaminase
KO
K07250
4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:
2.6.1.19
2.6.1.22
2.6.1.48
]
Organism
ncp Novosphingobium capsulatum
Pathway
ncp00250
Alanine, aspartate and glutamate metabolism
ncp00280
Valine, leucine and isoleucine degradation
ncp00310
Lysine degradation
ncp00410
beta-Alanine metabolism
ncp00640
Propanoate metabolism
ncp00650
Butanoate metabolism
ncp01100
Metabolic pathways
ncp01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
ncp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
U0041_18025 (gabT)
00650 Butanoate metabolism
U0041_18025 (gabT)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
U0041_18025 (gabT)
00280 Valine, leucine and isoleucine degradation
U0041_18025 (gabT)
00310 Lysine degradation
U0041_18025 (gabT)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
U0041_18025 (gabT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ncp01007
]
U0041_18025 (gabT)
Enzymes [BR:
ncp01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.19 4-aminobutyrate---2-oxoglutarate transaminase
U0041_18025 (gabT)
2.6.1.22 (S)-3-amino-2-methylpropionate transaminase
U0041_18025 (gabT)
2.6.1.48 5-aminovalerate transaminase
U0041_18025 (gabT)
Amino acid related enzymes [BR:
ncp01007
]
Aminotransferase (transaminase)
Class III
U0041_18025 (gabT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_3
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
WQD92851
LinkDB
All DBs
Position
complement(3915887..3917173)
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AA seq
428 aa
AA seq
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MADNASLLARREQAVPRGVASSTAVFADRADNAELWDVEGRRFVDFAGGIAVLNTGHRHP
KVMAAVQAQLERFTHTAFQVCPYESYVALAEKLNALAPFSGPAKTLLLTTGAEATENAVK
VARAATGRSAVIAFTGGFHGRTLLASAMTGKTTPYKRRFGPMPGEVFHAPFPTGLNGNTV
ERTLEAIQYLFAADVEPERVAAFIVEPVQGEGGFHVAPPAFLEALRALADQHGILLIADE
VQAGFARTGKMFGIENSGVEPDLVCVAKSLAGGFPLAGLIGRAPLMDALDPGGLGGTYGG
SPIGCAAALAVLEVIEEDGLCARAAAIGQRMRTRVEGFAAAGLPVANIRGLGAMFGFDVT
NAAGETDGALAKAVTVAALERGLILLSCGTKGETIRVLVPLTASDELIDEGLDLVEQALA
TVAGKVMA
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggccgataacgcctctcttcttgcccgccgtgaacaggccgtgccgcgcggcgtggca
tcatccaccgcggtgtttgccgatcgcgcggacaatgccgaattgtgggacgtggaaggg
cgccgcttcgtcgattttgccggtggcattgccgtgctcaataccgggcaccgccacccc
aaggtcatggccgcggtgcaggcgcaactggaacgctttacccacaccgcgttccaggtc
tgcccttatgaaagctatgtcgcgctggcggaaaaattgaacgctctcgccccattttcc
gggccggccaagaccctgctgctcaccaccggggctgaggccacggaaaacgcggtgaaa
gtggcgcgcgcggcaacggggcgttcggcggtgatcgcctttaccggcggttttcatggc
cgcacgctgctggccagtgcgatgaccggtaagaccacgccctacaagcgccgctttggc
ccgatgccgggcgaggtgttccacgcgccgttccccaccggcctcaatggcaacacggtg
gagcgcacgctggaggcgatccaatacctgtttgccgccgatgtggagcccgagcgcgtg
gcggcgttcatcgtcgagccggtgcagggcgaaggcggctttcacgtggcgccgccggca
ttcctggaagcgctgcgtgccctggctgatcagcacggcatcctgctgatcgccgacgag
gtgcaggccggctttgcccgcaccggcaagatgttcggcatcgaaaattccggggtggaa
cccgatctggtctgcgtggccaagtcgctggccggcggctttccgctcgccgggctgatc
ggccgggcgccgctgatggacgcgctcgatcctggcggtctgggcggcacctatggcgga
tcgccgatcggctgcgcggctgcgctcgccgtgctcgaggtgatcgaggaagacggcctc
tgcgcccgcgccgctgcgatcgggcagcgcatgcgcacgcgggtggaaggctttgccgcc
gccggcctgccggtggccaatattcgcgggctcggcgcgatgttcggctttgacgtgacc
aatgccgccggggaaaccgatggcgccctggccaaggcggtgaccgttgctgcgctggaa
cgcgggctgatcctgctgtcgtgcggcaccaagggcgaaaccattcgcgtgcttgtaccg
ttgaccgcttcggacgaactgatcgacgaagggctcgatctggtggaacaggccctggcg
acagtggccggcaaggtgatggcatga
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