Novosphingobium capsulatum: U0041_18510
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Entry
U0041_18510 CDS
T10206
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
ncp Novosphingobium capsulatum
Pathway
ncp02020
Two-component system
ncp02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ncp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
U0041_18510
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
U0041_18510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncp03021
]
U0041_18510
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ncp02035
]
U0041_18510
Transcription machinery [BR:
ncp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
U0041_18510
Bacterial motility proteins [BR:
ncp02035
]
Flagellar system
Flagellar assembly proteins
Stator
U0041_18510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r4_2
Sigma70_r2
Sigma70_r3
Rv2175c_wHTH
UPF0122
PhyR_sigma-like
Motif
Other DBs
NCBI-ProteinID:
WQD92944
LinkDB
All DBs
Position
complement(4016783..4017514)
Genome browser
AA seq
243 aa
AA seq
DB search
MKHDHRSFAASRAYRDDTADRIRRFLPMVRRLAWHVHGSGHSGVDVDDLVQAGLVALTEC
AQKHSGPTEDGFAAYAKLRVRGAMVDLVRRTMPLSRTSSDRRRTLREKTNQLTMELGRMP
SEPELARALGLTDTELADLRAASEPVRIEAIDDAYSDSDSAFADDRPDAFAQLADSESRQ
LVAKAIAALPERLQLVIQLYFVEELNLAEIAQVLEVSVPRVHQLKAQALDKLRAGLGSGF
DVL
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgaaacacgatcaccgcagctttgccgcctcgcgtgcctatcgtgacgataccgccgat
cgcattcgccggttcctgccgatggtgcgccgcctggcctggcacgtgcacgggtctggc
cattccggggtggatgtcgatgatctggtccaggcgggcctggtggcgctgaccgaatgc
gcgcaaaagcattccggccccaccgaagatggctttgccgcctatgccaagctgcgggtg
cgcggggcgatggtggatctggtgcggcgcaccatgccgctttcgcgcacctcgtccgat
cggcggcgcaccttgcgcgaaaagaccaaccagctgaccatggaactgggccgcatgccc
agcgagcccgaactggcccgcgccctggggctgaccgacaccgaactggccgacctgcgc
gcggcgagcgagccggtgcggatcgaggcgatcgacgatgcctattccgacagcgacagc
gcctttgccgacgatcgccccgatgcctttgcccagctggccgacagcgaaagccgccaa
ctggtagccaaggccatcgccgcactgcccgagcggttgcaactggtgatccagctctat
ttcgtggaggaactgaacctggcggaaatcgcccaggtgctggaagtatccgtcccgcgc
gtgcaccagctcaaggcccaggccctggacaaactgcgcgctggcctgggcagcgggttc
gacgtgctgtga
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integrated database retrieval system
