Novosphingobium capsulatum: U0041_19680
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Entry
U0041_19680 CDS
T10206
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
ncp Novosphingobium capsulatum
Brite
KEGG Orthology (KO) [BR:
ncp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ncp02000
]
U0041_19680
Transporters [BR:
ncp02000
]
Other transporters
Pores ion channels [TC:
1
]
U0041_19680
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
WQD95300
LinkDB
All DBs
Position
unnamed01:188501..190837
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AA seq
778 aa
AA seq
DB search
MIGTTRKRAMRGAAMALAMMAGTAAVAAHAAAANDAGAADGTRPIRVIGHPDPEGLLPDT
DAPKAVSTIGAAFIEKQAATFNAFQLVNILPGANVAGTDPFGLSTSSSLTLRGLGQDAIG
VTMEGAPQNDIGYYFAYPAQFADPENVARVELSQGSADIAAPVINAVGGLLALSLDAPHR
DFGVMADASLGSFNERRVFVRVDSGNLGQAPVRAFLSYSNNSADNWRGPGVDKRQHIDAK
IAGEWGNGNTASLSVSYNDASNSTYLSPTLADWQAQGRGFNLSASYGEGDLNYWRLYRQP
FRNLYFAAPVHLVLGTGLTLDTTSYLQFGYGNSPYGASLGPDGYYPGTYLGTQALDAPLK
LAGLENGGTVNVLGNWLGEQMRAGQIARLTLARGAHTLTAGLWIDYGSDRVVESFTPLGA
NGDPVDGWARDEHAVRTADGRLFSIGDTKTITVAKAFFLADSVALSPRVTLDLGFKGVDL
LHAGRNNLPGNQGRLHFDSFAALPRAALHVRLTDRQQVFANITTNFRAPDEYTLYDTYDG
YGGIATYGTTALKNEYSLAQELGWRWQGRNLSASATGFHYAFRNRLVATMANVNGAMVNT
TLNAGRQESWGVDAEVDWRPLAGMSLYASGEWLRARIKDNLPAGGDFLPTAGKVAVSSPA
WQFALGGTYDDTHLFGSFAMKYLGPQFATFMNDERIPGYATLDLSIGVHLAAWLDGKRTD
LRLNAINVTNPHVLSGVQAVTPAARDTIGTGGTLIAGAAPSYYIGSGRAFMVTLARQF
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgatcggcacgacgcgcaagcgggccatgcggggcgcggccatggcgctggcgatgatg
gcgggaacggccgccgtcgctgcccatgccgctgcggccaatgatgccggcgcggctgac
ggcacccgcccgatccgcgtcatcggccatcccgatcccgaagggctgctgcccgatacc
gacgcgcccaaggcggtcagcacgatcggcgcggcgttcatcgaaaagcaggccgccacg
ttcaacgcgttccagctggtcaacatcctgcccggcgccaatgtcgccggcaccgatccg
ttcggcctgtccacctcgtccagccttaccctgcgcgggttgggccaggatgccatcggc
gtgaccatggaaggcgcgccgcagaacgacatcggctattactttgcctatccggcgcag
tttgccgatcctgagaatgtggcgcgggtggaattgagccagggctcggccgatatcgcc
gcgccggtgatcaatgccgtgggcgggttgctggccttgagcttggacgcgccgcaccgc
gatttcggcgtgatggccgatgcctcgctcggctcgttcaacgaacgccgcgtgttcgtg
cgtgtggacagcggcaacctgggccaggcgccggtgcgcgcgttcctgtcctattccaac
aacagcgccgacaactggcgcgggccgggcgtggacaagcgccagcacatcgacgccaag
atcgccggcgaatggggcaatggcaacaccgccagcctgtcggtttcctataacgacgcc
agcaattccacctatctcagcccgacgctggccgattggcaggcgcaggggcgcgggttc
aacctgtcggccagctatggcgagggcgatctcaactattggcggctctatcgccagccg
ttccgcaacctctatttcgcagcgccggtgcatctggtgctgggcacggggctgacgctc
gataccaccagctatctccagttcggctatggcaactcgccctatggcgcctcgctcggg
cccgatggctattaccccggtacttatctgggcacccaggcgcttgacgcgccgctcaag
ctcgctggcctggaaaatggcggcacggtcaacgtgctgggcaactggctgggcgaacag
atgcgcgccgggcagatcgcgcggctgaccctggcgcgcggcgcccacacgctgacggcc
gggctgtggatcgactatggcagcgaccgcgtggtggaaagctttaccccgctgggcgcc
aatggcgatccggtcgatggctgggcgcgcgacgaacacgccgtgcgcaccgccgatgga
cggctgttctcgatcggcgataccaagacgatcaccgtggccaaggcgttcttcctggcc
gacagcgtggccctgtcgccgcgcgtgacgctggacctgggcttcaagggagtggacctg
ctccacgccgggcgcaacaatctgcccggcaaccagggccgcctgcatttcgatagcttt
gccgcgctgccgcgcgcagcgctgcatgtgcggctgaccgatcggcagcaggtctttgcc
aatattaccaccaacttccgcgcgcccgacgaatacacgctctacgatacctatgatggc
tatggcggcattgccacctacggcaccaccgcgctgaagaacgaatattcgctggcgcag
gagctgggctggcgctggcaggggcgcaatctgtccgcctcggccaccgggtttcactat
gccttccgcaaccgcctggtggcgacgatggccaacgtcaacggcgcaatggtcaacacc
acgctcaatgccgggcggcaggaaagctggggcgtcgatgccgaagtcgattggcgccct
ctcgcggggatgagcctctatgcctcgggcgagtggctgcgcgcgcggatcaaggacaac
ctgccggcgggtggcgatttcctgcccacggcgggtaaggtcgcggtatcgagcccggcc
tggcagtttgcgctgggcggcacctatgacgatacgcacctgttcggcagtttcgcgatg
aaatatctcgggccgcagttcgcaacgttcatgaacgacgagcgcattcccggctatgcc
acgctcgacctgtcgatcggcgtacacctggccgcctggctcgacggcaagcgcaccgat
ctgcgtctcaacgccatcaacgtgaccaatccccatgtgctgtcgggcgtgcaggcggtg
acgccggccgcgcgcgacaccatcggcaccggcggcacgctgatcgcgggcgcggcgccc
agctattacatcggcagcgggcgggccttcatggtcaccctggcgcggcagttttga
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