Novosphingobium capsulatum: U0041_21860
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Entry
U0041_21860 CDS
T10206
Symbol
traC
Name
(GenBank) type IV secretion system protein TraC
KO
K12063
conjugal transfer ATP-binding protein TraC
Organism
ncp Novosphingobium capsulatum
Brite
Secretion system [BR:
ncp02044
]
Type IV secretion system
Conjugal transfer pilus assembly protein
U0041_21860 (traC)
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WQD95608
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Position
unnamed02:96833..99424
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AA seq
863 aa
AA seq
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MARGFLDELLSGIFGDTKRPDVQRPDLSIPMLAHWLPYRSYDPKTGIFYNSASRGFVIEA
APLVGADERTGEILSQFMSEGVPAPGCLQIHQWMSPRIGERLSKWYVPRYSARGVYERMA
KHRVDFLTDGVWESLSADAPFCLRNHRVAISYSTPESSSITVEQIVSLMDGLISALQSVN
VAARRMDPVALIGWIDDITSPTTAAGEDAVSYNPLDPIADQAIRRDIELHIEPDRMLLRT
ERFRPTGKTLKGAPEIGEIYPDVFDVRSFSVRNLPSRWAPWDVTRLIGDMFTDKLRMPCP
VATNLCIEFPDQQASTNKASYKFMRTTSLADSKSSRFLPQLREQSQEWRYVNEEIRQGRK
LVRVFFSATSFSPKGQGDSNERVLKSIYRAAGWDLLDDRYLQVMGLLCAMPMTMANGLSK
DLERMKRMRTLLTTTAANLAPLQGEYLGGTIPHLLLIGRRGQPFFWSPFENSAGNHNVAV
FGKSGSGKSVALQELCGSLCGAGARVVVIDDGRSFEHSAKLQGGAFVEFTMSSGFCLNPF
SMIDETQAVEDEDYLLDCMAMLKAIINQMSRHINLLDDTERGLIDGAVNQVWEAHGSRGS
IDLVIEALEATGNGLAVNLAIAMRPFSSGGTYGRFFQGEVSFELKSQLTVFELSDLSARE
ELRSVVLTAIMFMSQQMMRKLDRSIPKALLLDEAWQMLRGGAMADFIETYARTCRKYGAS
LVTATQSLNDYYKSAGSIAALENSDWFVILQQKPETIADFKKHDRFEMDDYTDALLRSLK
RNGFEYSDIMIKGPDTLAVGRLVLDPYSATLFSSSPKTFAAIDALIAEGLSIDEAIERIA
FPDNPEKWVSSLVPADEAAIAAE
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcggctttctggatgagctgttgtcgggcatcttcggagacaccaagcggccc
gacgtgcagcgtccggacctctcaatcccgatgctggcgcactggctgccttatcgcagc
tatgatcccaagacgggaatcttctataacagcgcgtcacggggtttcgtcatcgaagcc
gcgccactcgtgggagccgacgagcgcaccggcgagatcctgtcgcaatttatgtccgaa
ggcgtcccggcgcctggatgtcttcaaatccatcaatggatgtcgccgcgcataggagag
cgcctgtccaagtggtatgtcccgcgctactcggcgcgcggcgtctatgaacggatggca
aagcatcgggtcgattttctcacggatggcgtctgggaatcgctctcggccgatgcaccc
ttctgcctgcgcaatcaccgcgtcgcgatctcctattcaaccccggaatcatcctccata
acggtcgaacagatcgtctcgctgatggacgggctgatttccgcgctccagtcggtgaac
gtcgcggcgcgcaggatggatcccgtagcccttatcgggtggatcgacgacattacttct
ccaacgacagcggccggcgaggacgccgtcagctacaaccccctcgatcccatcgccgat
caggcaatccgccgagacatcgaactgcatatcgagccggaccggatgctgctgcggacc
gagcgctttcggccgacgggcaagacgttgaagggcgcgccggagatcggtgagatttat
ccggacgtgttcgacgtgcgctccttctcggtgcgcaatctcccgagccgttgggcgccg
tgggatgtgacgcggctgatcggcgacatgttcaccgacaagctgcgcatgccctgtccg
gtcgcgaccaatctttgcatcgagtttcccgaccagcaggcctcaaccaacaaggccagc
tacaagttcatgcgcaccaccagcctggccgattccaagtcgtcgcgatttctgcctcaa
ctccgcgaacagtcgcaggaatggcgctacgtcaacgaggaaattcgacaaggccgcaag
ctcgtgcgcgtattcttcagcgccacgtcattctcgcccaaagggcagggcgacagcaac
gagcgcgtcctgaaatcgatctaccgagccgcaggctgggacctgctcgatgatcgatat
ctccaagtcatgggtctgctttgcgcgatgccgatgacgatggcgaatggtctgtcgaaa
gatcttgaacgcatgaagcggatgcgcaccctgctcacgacgacggccgccaatcttgcg
ccgctgcagggcgagtatctcggcggaaccataccgcatttgctactcatcggccgccgc
ggccagcccttcttctggagcccattcgaaaacagcgcgggcaaccacaacgtcgcggtg
ttcggcaagtcgggatccggcaagtcggtggcgttgcaggagctttgcggctcattgtgc
ggcgccggggcgcgcgtggtagtgatcgacgacggacggtcgttcgagcattcggcgaag
ttgcaaggcggcgcttttgtcgagttcaccatgagctcgggcttctgcctgaatccgttt
tcaatgatcgacgaaacgcaggctgtcgaagacgaggattatcttctcgactgcatggcg
atgctgaaagcgatcatcaaccagatgtcgcggcatataaatctactcgacgatacggaa
cgtggcctgatcgacggagcggtgaatcaggtctgggaagcgcacggaagccgtggctcg
atcgatctggtaatcgaggcgctcgaggcgacagggaacgggctcgcggtcaatctcgcg
atcgcgatgcgacccttctcatccggcggaacttatggccgctttttccagggagaggtt
tcgttcgagcttaaatctcagctcaccgtcttcgaattatccgacctgtccgcgcgtgag
gaactgcgcagcgttgtcctcacggcgatcatgttcatgtcgcagcagatgatgcgcaag
ctcgatcgctcgattccaaaggcgctgcttctcgatgaagcgtggcaaatgctccgtggg
ggtgcgatggccgatttcatcgagacctatgcgcgcacatgccggaaatatggcgcctcc
ctcgtcacggcgacgcagtcgctgaacgactactacaaatcggccggttcgatagccgcg
ctcgaaaactccgactggttcgtgatccttcagcagaaaccggagacaatcgcggacttc
aagaagcacgatcgtttcgaaatggacgattatacggacgccctgcttcgttcactgaag
cgtaacggcttcgaatattccgacatcatgatcaaagggcctgataccttggctgttggc
cgtctggtgctggatccttattcggcgaccctcttctcttcgagccccaaaaccttcgcc
gcgatcgacgcgctcatcgcggaaggtttgagcatcgatgaggcgatcgagcggatcgcc
ttccccgacaatcctgaaaaatgggtgagcagcctcgtcccggcggacgaggctgccatc
gcggcggagtag
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