Nocardioides coralli: K6T13_00030
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Entry
K6T13_00030 CDS
T08149
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
ncq
Nocardioides coralli
Brite
KEGG Orthology (KO) [BR:
ncq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ncq03032
]
K6T13_00030 (gyrB)
03400 DNA repair and recombination proteins [BR:
ncq03400
]
K6T13_00030 (gyrB)
Enzymes [BR:
ncq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
K6T13_00030 (gyrB)
DNA replication proteins [BR:
ncq03032
]
Prokaryotic type
DNA Topoisomerases
K6T13_00030 (gyrB)
DNA repair and recombination proteins [BR:
ncq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
K6T13_00030 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
QZY29165
LinkDB
All DBs
Position
6335..8443
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AA seq
702 aa
AA seq
DB search
MSDEPAVESNQQADQQASLPRSDEVAYDASAIQVLEGLEAVRKRPGMYIGSTGERGLHHL
IWEIVDNAVDEALAGHCDRIVLTLLEDGGVRVEDNGRGIPTDTAPGQELPALTLALTVLH
AGGKFGGGGYKVSGGLHGVGVSVVNALSSRVVAEAKNRGHLWRQSFSVGVPDAELEQVRP
LEVGERTGTTITFWASPDIFETTHYSLETITSRVREYAFLNKGLEIVVRDERPSADQVAE
AVEDETVADNVDQAGADAIKRGEHGGIEQVFRYDRGLVDYVEHLNRRKDKANPTIINFEA
ETPGETDQHMSLEVAMQWNASFTESVHTFANTINTHEGGTHEEGFRAALTSLINNWGEEW
GLVKKKEDRVTGDDIREGLTAIVSIKMGEPQFEGQTKTKLGNTEAKGFVQRVVNDQLGAW
LEQNPAEGKDIVRKAQAAASARIAARNARNLARSRKGLLGGGGLPGKLADCQSTNPEECE
VFIVEGDSAGGSAKQGRDPRVQAILPIRGKILNVEKARIDKVLANTEVQAIISALGTGIH
EEFDLAKLRYHKIVLMADADVDGHHINTLLLTLLFRFMKPLIEHGYVYMAQPPLYRLRWN
KPHEHEFVYSDAERDALLRDGVAQGKKLPKENPVQRYKGLGEMNADELWETTMDPSARIL
LQVTLEDAARADEVFSILMGEDVEQRRSFIQRNAKDVRFLDI
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacgaacccgccgtcgagagcaaccagcaggctgatcagcaggcctccctcccc
cgctccgacgaggtcgcctacgacgcgtcggcgatccaggtgctcgaggggctcgaggcc
gtccggaagcggccgggcatgtacatcggctcgaccggcgagcgcggcctccaccacctg
atctgggagatcgtcgacaacgccgtcgacgaggcgctggccggccactgcgaccggatc
gtgctcaccctgctcgaggacggtggcgtccgggtcgaggacaacggccgcggcatcccc
accgacaccgctcccggccaggagctcccggcgctcacgctcgcgctcaccgtgctgcac
gccggtggcaagttcgggggcgggggctacaaggtgtccggtggcctccacggtgtgggc
gtctccgtcgtcaacgcgctgtcctcccgggtcgtcgcggaggcgaagaaccgtggccac
ctctggcggcagtccttcagcgtcggcgtgcccgacgccgagctcgagcaggtgcgaccg
ctcgaggtcggggagcggaccggcaccaccatcaccttctgggcctcccccgacatcttc
gagaccacgcactactcgctggagaccatcacgtcccgggtccgcgagtacgccttcctc
aacaagggcctcgagatcgtggtccgggacgagcggccctcggccgaccaggtcgccgag
gccgtcgaggacgagacggtcgccgacaacgtcgaccaggccggtgccgacgccatcaag
cgcggcgagcacggaggcatcgagcaggtcttccgctacgaccgcggtctggtcgactac
gtcgagcacctcaaccggcgcaaggacaaggcgaaccccacgatcatcaacttcgaggcc
gagacgccgggcgagaccgaccagcacatgagcctcgaggtcgccatgcagtggaacgcc
tcgttcaccgagtcggtccacaccttcgccaacaccatcaacacccatgagggcggcacc
cacgaggagggcttccgcgctgcactcacctcgctcatcaacaactggggcgaggagtgg
ggcctggtgaagaagaaggaggaccgcgtcaccggcgacgacatccgcgagggcctcacc
gccatcgtgtcgatcaagatgggcgagccgcagttcgagggacagaccaagaccaagctc
ggcaacaccgaggccaagggattcgttcagcgggtcgtcaacgaccagctcggcgcctgg
ctcgagcagaaccctgccgagggcaaggacatcgtccgcaaggcgcaggcggcggccagc
gcacgcatcgccgcgcgcaacgcccgcaacctggcgcggtcccgcaagggcctgctgggt
ggcggcgggctccccggcaagctggccgactgccagtcgaccaaccccgaggagtgcgag
gtcttcatcgtcgagggcgactcggccgggggctcggccaagcagggtcgtgacccgcgg
gtccaggcgatcctcccgatccgcggcaagatcctcaacgtcgagaaggcccgcatcgac
aaggtgctggccaacaccgaggtgcaggcgatcatctccgccctcggtaccggcatccac
gaggagttcgacctcgccaagctgcgctaccacaagatcgtgctgatggccgacgccgac
gtcgacggccaccacatcaacacgctcctgctgacgctgctgttccggttcatgaagccc
ctgatcgagcacggctacgtctacatggcccagcccccgctctaccggctgcgctggaac
aagccccacgagcacgagttcgtctactccgacgccgagcgcgacgcactgctcagggac
ggggtcgcccagggcaagaagctgcccaaggagaacccggtccagcgctacaaggggctc
ggtgagatgaacgccgacgagctgtgggagacgaccatggacccctcggcccggatcctg
ctgcaggtgaccctcgaggacgccgcccgggccgacgaggtcttctccatcctcatgggg
gaggacgtcgagcagcggcgctccttcatccagcgcaacgccaaggacgtccgattcctc
gatatctag
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