Nocardioides coralli: K6T13_00855
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Entry
K6T13_00855 CDS
T08149
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ncq
Nocardioides coralli
Pathway
ncq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ncq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
K6T13_00855 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncq03400
]
K6T13_00855 (recD)
Enzymes [BR:
ncq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
K6T13_00855 (recD)
DNA repair and recombination proteins [BR:
ncq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
K6T13_00855 (recD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
AAA_22
NAT10_TcmA_helicase
UvrD-helicase
RecD_N
PhoH
SH3_13
UvrD_C
SLFN-g3_helicase
Mg_chelatase
AAA_28
NTPase_1
AAA_24
AAA_16
T2SSE
nSTAND3
CbiA
DEAD
SRP54
AAA_5
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
QZY29301
LinkDB
All DBs
Position
167130..168872
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AA seq
580 aa
AA seq
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MTELFEPTDAADRRLVQGAAGLLGDFNRAGVLSAADVHVAERTGELAGDDDAEVRLAVAL
AVRAVRHGSVGVDLDAVRAIAPDLAWPAPTPWADRVAASALLESGVLQQEHGLVYLDRYH
RLERQVADDVLARSRQVPPVVDEQRLADGLSAVRDDHLSEAQEAAAVAAVRHWTTVVTGG
PGTGKTTTVARLLALLALQSDRPPAVALTAPTGKAAARLAEAVAEEMPDAVRDRVGSPAA
MTLHRLLGWRRDNTTRFRHDRGNRLKYDVVVVDECSMVDLTLMARLLEAVRPDTRLVLVG
DPRQLTSVGAGAVLSDLVEGLRTLPGAAVRELVTNYRSAVDIQHVAEALRDAGSGDADGV
LAALRVDSDQVRFVETDDPEQELRPGLVAHALRIRERAAAGDVTGSTGLLEEFRLLCAHR
EGPRGVRHWNRLVEQWLAEETGQAIWSPWYVGRPLLVTANDYALQVYNGETGVAVATDGR
LRAWIDGAGGTTELAPGRLDAVDTMHALTIHKSQGSQADEVVVLLPEEGSRLLTRELFYT
AVTRARDRLRVVGSEAAVRAAVATRAQRATGLRQRLDDET
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgagctcttcgagcccaccgacgctgccgaccgccgcctggtccagggagccgcc
ggcctgctgggcgacttcaaccgggccggcgtgctctcggccgccgacgtccacgtcgcc
gagcgcaccggtgagctcgcaggtgacgacgatgccgaggtcaggttggccgtggcgctc
gcggtgcgggcggtccgccacggctcggtgggggtcgacctcgacgccgtacgcgcgatc
gctcccgacctcgcgtggcccgcgcccacaccgtgggccgatcgcgtggcggcctcggcg
ctgctcgagagcggggtgctgcagcaggagcacggcctggtctacctcgaccgctaccac
cggctcgagcggcaggtcgccgacgacgtcctcgcccggagccgtcaggtcccgcccgtg
gtcgacgagcagcgtctggccgacgggttgtccgccgtgcgcgacgaccacctcagcgag
gcccaggaggccgcggccgtcgccgcggtccgtcactggaccaccgtggtcaccgggggc
cccgggacgggcaagaccaccacggtggcgcggctcctggcgctgctggcgctccagtcc
gaccggccgccggcagtggcgctcaccgcccccaccggcaaggccgcggcccggctcgcg
gaggccgtcgccgaggagatgcccgacgcggtccgcgaccgggtcggcagcccggcagcg
atgacgctccaccgcctgctcggctggcggcgtgacaacaccacgcggttccgccacgac
cgcggcaaccggctcaagtacgacgtcgtggtcgtcgacgagtgctcgatggtcgacctc
acgctgatggcgcgcctcctcgaggcggttcgtcccgacacccggctggtcctcgtcggc
gacccgcggcagctgacgtccgtgggcgcgggagcggtgctctccgacctcgtcgagggc
ctccgcaccctgcccggagcggccgtccgcgagctcgtcaccaactaccgctccgcggtc
gacatccagcacgtggccgaggcgctccgcgacgccgggtccggtgacgccgacggtgtg
ctcgcggcgctgcgcgtcgactccgaccaggtccggttcgtggagaccgacgaccccgag
caggagctgcgtccggggctggtcgcccatgcgctgcgcatccgggagcgggccgcagcc
ggtgacgtcaccgggtcgaccggcctgctcgaggagttccggctgctctgcgcccaccgg
gagggcccccgcggcgtacgccactggaaccggctcgtcgagcagtggctggcggaggag
accggccaagcgatctggtcgccctggtacgtcggcaggccgctgctggtcacggccaac
gactacgcgctgcaggtctacaacggcgagacgggcgtggccgtcgccaccgacggtcgg
ctgcgggcctggatcgacggtgcgggtggcaccaccgagctggcgccggggcgactcgat
gccgtcgacaccatgcatgcgctcaccatccacaagagccaggggagccaggccgacgag
gtggtggtgctcctgcccgaggagggctcgcggctgctgacccgcgagctcttctacacc
gccgtcacccgcgcccgcgaccggctccgggtcgtggggtcggaggccgccgtccgggct
gccgtcgcgacacgggcacaacgcgccaccggcctgcgccagcggttggacgacgaaacc
tga
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