Nocardioides coralli: K6T13_01450
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Entry
K6T13_01450 CDS
T08149
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
ncq
Nocardioides coralli
Pathway
ncq00550
Peptidoglycan biosynthesis
ncq01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ncq00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
K6T13_01450 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ncq01002
]
K6T13_01450 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ncq01011
]
K6T13_01450 (dacB)
Enzymes [BR:
ncq01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
K6T13_01450 (dacB)
Peptidases and inhibitors [BR:
ncq01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
K6T13_01450 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
ncq01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
K6T13_01450 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
QZY29403
LinkDB
All DBs
Position
293104..294546
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AA seq
480 aa
AA seq
DB search
MAGRDRGHGEHGSVRGWLALVLVLAVAGGVATAWRLDLLDHWLADPPDPVTEPAAVPPPE
GVEVPALPEPPPVAEAADGARVDPAAVRRALARGLRDEDLGRSVHAAVAGLDDDRAPAYA
AGSGAFMPASTMKLLTGVAVLDALGPDHRFATTVVARGRTLTLVGGGDPLLARRPASSDS
WPPRADLLDLARRTVRALPDAATRRPVRLRYDTGLFTGPAENPYWRADYVADDIVAPVSA
LWVDGGRESSGIGRVDDPAATAAAAFVDALGRRGVRVAGSPRPGTAPTRAEEVARVESAP
LSQLVEHAILVSDNETSEVLSHHVGLAVVDDASFAGGARGVRRTLAGLGVPMAGAVLRDG
SGLARGNRLRPLTLVEVLRLAAEDARPELRSVLTGLPVGAFTGSLTYRFDRAPRDSLGRV
RAKTGTLTGVSALAGVAVDATGNPLAFVLAADRVRLPDTLDARQDIDNLAGALGACRCSR
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
gtggccggacgtgaccgaggccacggggagcacggctcggtccggggctggctcgccctg
gtgctcgtcctggccgtggccggtggggtcgcgacagcgtggcggctcgacctgctcgac
cactggctggcggacccgcccgacccggtgaccgagccggccgcggtgcccccgccggag
ggcgtcgaggtacccgcgctgccggagccgccccccgtcgccgaggccgccgacggggcc
cgggtcgacccggccgccgtacgccgtgccctcgcccgtggcctgcgcgacgaggacctc
ggccgctcggtccacgccgcggtggccgggctcgacgacgaccgcgcaccggcctacgcg
gccggatccggggcgttcatgcccgcctcgaccatgaagctgctgacgggggtcgcggtg
ctggacgccctcggccccgaccaccgtttcgccaccacggtcgtggcccgcggccggacc
ctcacgctcgtgggcggcggtgacccgttgctggcccggcgacccgcctcgagcgactcc
tggcctccgcgcgcggacctgctcgacctggcccggcgcacggtccgggcgctgccggac
gccgcgacccggcgaccggtgcggctgcgctacgacaccggcctcttcaccgggccggcg
gagaacccctactggcgtgccgactacgtggccgacgacatcgtggctccggtcagcgcg
ttgtgggtcgacggggggcgggagtcctcgggcatcgggcgcgtcgatgatcccgcggcg
accgcagcggccgccttcgtggatgcgctgggacgacgtggcgtccgcgtcgccggcagc
ccccggccgggcacggcaccgacccgggccgaggaggtcgcccgggtggagagcgccccg
ctctcgcagctggtcgagcacgcgatcctcgtcagtgacaacgagacctccgaggtgctc
tcccaccacgtgggtctcgccgtggtcgacgacgcctcgttcgccggcggcgcccgcggc
gtacgccgcacgctggcggggctcggggtgccgatggccggcgcggtgctgcgcgacggc
agcggcctcgcccggggcaaccggctccggccgctcacgctggtcgaggtgctgcggctc
gccgccgaggacgcgcgacccgagctgcgcagcgtcctcaccggcctcccggtgggcgcg
ttcacgggctcgctgacctatcgcttcgaccgcgccccccgggactccctgggacgggtg
cgggccaagaccggcacgctgaccggggtcagcgccctcgcgggcgtggccgtcgacgcg
acgggcaaccccctggccttcgtcctggccgccgaccgggtgaggctcccggacaccctc
gatgcccggcaggacatcgacaacctcgccggcgcgctgggcgcctgtcgctgctcgcgc
tga
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