Nocardioides coralli: K6T13_02910
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Entry
K6T13_02910 CDS
T08149
Symbol
secD
Name
(GenBank) protein translocase subunit SecD
KO
K12257
SecD/SecF fusion protein
Organism
ncq
Nocardioides coralli
Pathway
ncq02024
Quorum sensing
ncq03060
Protein export
ncq03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ncq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
K6T13_02910 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
K6T13_02910 (secD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
K6T13_02910 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ncq02044
]
K6T13_02910 (secD)
Secretion system [BR:
ncq02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
K6T13_02910 (secD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
MMPL
Motif
Other DBs
NCBI-ProteinID:
QZY29660
LinkDB
All DBs
Position
574642..576912
Genome browser
AA seq
756 aa
AA seq
DB search
MSRGAWFRLLLVIGVLAGAGWVAMEREPKLGLDLQGGAQFVFEAQSTEQTEATPENVDRT
LEVLRGRVDALGVTEPTLVRQGDNRILVELPGITDEEEAEDAREQIGQTAQLSVHPVLRV
VADQNADPRQPDNLVLPSDQGDTLEMGPAALRGEEITGAEAAQPQDSLQWVVNVDFNRSG
SDAFGELSAEAACAQGAQNRIAIVLDDRVISSPGVEVPCGGSIRNSTQISGDFTVAEAQE
LSALIEGGALPLPLESISDRLVGPTLGDQAIADSFEAGIIGLILTGLFITVVYRFVGGLA
TLALASYALLAYAMLVGLGSTLTLPGLAGFVLAIGLAIDANVLVFERAREEYVDAPKAGL
RQALTIGFNKAWSAIIDSNITTLLAAALLFLLASGPVKGFGVTLSIGVIASMISALIIAR
LLTQAAVSTQALARRPKFAGLGYTGKVRGWLDRKKPDLMSRRRVWLATSVVALVAAIGGV
VGPGLSLGIEFTGGRTLDYSVSEDVSVDEARKAIADAGFPEAVVQGADTADFTVRVGDIS
NEEEDRIQASLEDIGGTVEQVDDQRIGASLGDELRNRALLAFGIALLAQMLYLAIRFKWT
FGLAAVLAMFHDVLIVVGLFAWLGKPIDGVFLAAALTIVGLSVNDKVVVFDRIRERWRAS
REGAFADIANTACLETVPRTVNTGLGAMFILAALAFLGGDSLQDFAVALLVGLIIGTASS
VFTATPILIWLQERFPMAREQKVKKARDPEDSGAVV
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtggtgcctggttccgcctcctcctcgtcatcggcgtgctcgccggagcgggc
tgggtggcgatggagcgcgagccgaagctgggtctggacctgcagggcggcgcgcagttc
gtcttcgaggcccagagcaccgagcagaccgaggcgacgccggagaacgtcgaccgcacg
ctggaggtgctgcgcggccgcgtcgacgccctcggcgtcaccgagccgacgctggtgcgg
cagggcgacaaccggatcctggtggagctcccgggcatcaccgacgaggaggaggccgag
gacgcgcgtgagcagatcgggcagaccgcccagctcagcgtgcacccggtgctccgggtc
gtcgccgaccagaacgccgacccacgccagccggacaacctcgtgctgcccagcgaccag
ggcgacaccctcgagatgggccccgccgcgctccggggtgaggagatcaccggcgcggag
gccgcccagccccaggacagcctgcagtgggtcgtcaacgtcgacttcaaccgttccggc
tccgacgccttcggcgagctgtctgccgaggccgcgtgtgcccagggggcccagaaccgg
atcgccatcgtgctcgacgaccgggtcatctcctccccgggtgtcgaggttccctgcggc
ggcagcatccgcaactcgacccagatctccggtgacttcaccgtcgcggaggcccaggag
ctgtcggccctcatcgagggtggcgcgctgccgctgccgctggagtcgatctccgaccgg
ctcgtcggcccgaccctgggtgaccaggccatcgcggactccttcgaggccggcatcatc
ggcctgatcctcaccggcctgttcatcacggtcgtctaccgcttcgtcggcggtctcgcg
acgctcgcgctggcgtcgtacgccctgctcgcctacgcgatgctcgtcggcctcgggtcg
accctgacgctcccgggtctcgcgggcttcgtgctcgccatcggtctcgcgatcgacgcc
aacgtgctggtcttcgaacgagcgcgggaggagtatgtcgacgcacccaaggcgggtctg
cggcaggcactgaccatcggcttcaacaaggcctggtcggcgatcatcgactccaacatc
acgacgctgctcgccgccgcgctgctgttcctgctggcctccgggccggtcaagggcttc
ggtgtgacgctgtcgatcggtgtcatcgcctcgatgatctcggcgctgatcatcgcccgg
ctcctgacgcaggcggcggtgtcgacccaggcgctggcccggcggcccaagttcgccggc
ctcggctacaccggcaaggtgcgcggctggctcgaccggaagaagcccgacctgatgtcg
cgccgccgggtgtggctggcgacctccgtcgtcgcgctcgtcgcggccatcggcggcgtc
gtcggcccgggcctcagcctcggcatcgagttcaccggtggccggaccctcgactactcc
gtctccgaggacgtctcggtcgacgaggcccgcaaggcgatcgccgacgccggcttcccc
gaggccgtcgtccagggcgccgacaccgccgacttcaccgtccgggtcggcgacatctcc
aacgaggaggaggaccggatccaggcctccctcgaggacatcggcggcactgtcgagcag
gtcgacgaccagcggatcggtgcctcgctcggcgacgagctgcgcaaccgggcgctgctg
gccttcggcatcgcgctgctggcccagatgctctacctcgcgatccggttcaagtggacc
ttcggcctcgcggccgtgctggcgatgttccacgacgtgctgatcgtggtgggcctcttc
gcgtggctcggcaagccgatcgacggcgtcttcctcgccgcggcgttgacgatcgtgggt
ctgtcggtcaacgacaaggtcgtcgtgttcgaccggattcgcgagcgctggcgggcctcg
cgggagggcgccttcgccgacatcgccaacaccgcctgcctcgagaccgtgccgcgaacc
gtcaacaccggtctcggtgcgatgttcatcctggcggcgctcgccttcctcggcggcgac
tccctgcaggacttcgcggtcgccctgctggtcggtctgatcatcggcaccgcgtcctcg
gtgttcaccgcgaccccgatcctgatctggctgcaggagcgcttcccgatggcccgcgag
cagaaggtgaagaaggcccgcgaccccgaggactccggcgcggtcgtctga
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