Nocardioides coralli: K6T13_03400
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Entry
K6T13_03400 CDS
T08149
Name
(GenBank) mismatch-specific DNA-glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
ncq
Nocardioides coralli
Pathway
ncq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ncq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K6T13_03400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncq03400
]
K6T13_03400
Enzymes [BR:
ncq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
K6T13_03400
DNA repair and recombination proteins [BR:
ncq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
K6T13_03400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QZY29752
LinkDB
All DBs
Position
complement(682528..683094)
Genome browser
AA seq
188 aa
AA seq
DB search
MARFTRAELEQFRDHEVPDLFGPDVRLLFVGINPGLWTAATQTHFAHPANRFYPALLRAG
IIDHPVSASDGMTDEDRARFTARGLGITNLARRATARAAELSDEELHAGGEALAALVARV
RPRVVAVAGVTAYRTAFGVRRAALGRQPEDLAGAELWVVPNPSGLNAHETIDTLAAAYAA
PARAAGVL
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcttcacccgtgccgagctggagcagttccgcgaccacgaggtgcccgacctg
ttcggacccgacgtgcggctgctcttcgtcggcatcaacccggggctctggaccgcggcc
acgcagacgcacttcgcccaccccgccaaccgcttctaccccgcgctgctgcgggccggg
atcatcgaccaccccgtcagcgcctcggacgggatgaccgacgaggaccgcgcccgcttc
accgcccgtggcctgggcatcaccaacctcgcccgccgggcgacggcccgcgccgccgag
ctctccgacgaggagctccacgccggcggcgaggcactggcggcgctggtcgcgcgggtg
cgtccccgggtggtggcggtcgccggcgtgacggcctaccgcaccgccttcggcgtacgc
cgggccgcgctcggccgccagccggaggacctcgccggcgcggagctgtgggtggtgccc
aacccgagcggcctcaacgcccacgagacgatcgacaccctggccgcggcctacgccgcg
ccggcccgcgcggccggcgtgctctga
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