Nocardioides coralli: K6T13_03800
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Entry
K6T13_03800 CDS
T08149
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ncq
Nocardioides coralli
Pathway
ncq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ncq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K6T13_03800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncq03400
]
K6T13_03800
Enzymes [BR:
ncq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
K6T13_03800
DNA repair and recombination proteins [BR:
ncq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
K6T13_03800
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QZY29823
LinkDB
All DBs
Position
773545..774363
Genome browser
AA seq
272 aa
AA seq
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MSPLPHPVTGQLFPSPVPAGTGWPDDPARPDTPVARTAAGVRRLAAGPDLASLDARVSVC
SACPRLVGWREQVAREKRASFADQPYWGRPIAGWGSATPRILVVGLAPAAHGGNRTGRVF
TGDSSGDWLFASLNRVGIATQETSRHAGDGQRLVEARMVATVRCAPPQNQPTVEERDTCA
PWLERELRLVLPHVRVVVALGGYGWAASLRGLESAGVAVPRPRPRFGHGTEVGLDGLTLL
GCYHPSQHNTFTGRLTPAMLDEVLGRARALAR
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
gtgagcccgctgccgcacccggtcacgggccagctgttcccgtcaccggtcccggccggg
accgggtggccggacgacccggcgcgaccggacacgcccgtcgcgcgcaccgctgccggc
gtacgccgcctggcggccggacccgacctggcctcgctcgacgcgcgggtgagcgtctgc
tcggcgtgcccgaggctcgtcggctggcgggagcaggtcgcccgggagaagcgggcctcg
ttcgccgaccagccctactgggggcggccgatcgccgggtgggggtcggcgacgccccgg
atcctcgtggtgggcctggcgccggcagcccacggtggcaaccgcaccggccgggtcttc
accggcgactccagcggcgactggctcttcgcgagcctgaaccgcgtcggcatcgccacg
caggagacctcccggcacgccggtgacgggcagcgcctggtcgaggcccggatggtcgcc
accgtgcggtgcgcaccgccacagaaccagccgaccgtcgaggagcgcgacacgtgtgcg
ccgtggctggagcgcgagctgcggctcgtgctgccgcacgtccgggtcgtggtggcgctg
gggggctacggctgggccgcgtcgctgcgaggcctcgagagcgcaggggtcgccgtgccg
cggccgcggccccggttcggccacggcaccgaggtcggcctcgacggactgaccctgctc
gggtgctaccacccgagccagcacaacaccttcaccgggcgtctcacgccggccatgctc
gacgaggtcctcggccgggcccgcgccctggcccggtga
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