Nocardioides coralli: K6T13_09280
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Entry
K6T13_09280 CDS
T08149
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
ncq
Nocardioides coralli
Pathway
ncq00260
Glycine, serine and threonine metabolism
ncq00630
Glyoxylate and dicarboxylate metabolism
ncq00670
One carbon pool by folate
ncq00785
Lipoic acid metabolism
ncq01100
Metabolic pathways
ncq01110
Biosynthesis of secondary metabolites
ncq01200
Carbon metabolism
Module
ncq_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
ncq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
K6T13_09280 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
K6T13_09280 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
K6T13_09280 (gcvP)
00670 One carbon pool by folate
K6T13_09280 (gcvP)
Enzymes [BR:
ncq01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
K6T13_09280 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
PmbA_TldD_1st
Pyridoxal_deC
Motif
Other DBs
NCBI-ProteinID:
QZY27713
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Position
complement(1895384..1898254)
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AA seq
956 aa
AA seq
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MSDHPSLRALDAASPFLDRHLGPRPDDIERMLQTLGYASLDALMEAAVPGAIRSAEDLAL
PDAADESTVARELRALAAQNRPAESMIGLGYHPTITPPVIRRNVLEDPSWYTAYTPYQPE
ISQGRLEALLNFQTVVGDLTGLPTANASLLDEGTAAAEAMTLVRRAKRSASGPFVLDADA
LPQTIDVVRTRAEAMGIEVVVADLDGGLPDGDLCGVLVQYPGAEGRVRDPRPLIEAAHDR
GALAVVAADLLALTLLEAPGELGADVVVGSSQRFGVPLFYGGPHAGYMAVGPGLERHLPG
RLVGVSVDAEGRPAYRLALQTREQHIRRDKATSNICTAQVLLAVVASMYAVYHGPEGLRA
IATRAHRYAAVLAAALRQAGHVVETDEFFDTIVVRAEGRAAEVVAAAREDGIHLRLVDDD
RIGISTSESTTLATLQSVLGAFGEEEATDLEALDQATGDAIPEALRRTTPYLTHEVFSTH
HSETAMLRYLRRLSDRDYALDRGMIPLGSCTMKLNATTEMEPVSLPGFADLHPFAPADDA
IGYRELVAQLEDWLATVTGYDRVSIQPNAGSQGELAGLLAIRGYHRARGDEQRDVCLIPS
SAHGTNAASAVMAGMRVVVVKAADDGSVDLDDLQAKCEEHAADLAAIMVTYPSTHGAYED
GITRLCEVVHEHGGQVYVDGANLNALLGHARPGEFGGDVSHLNLHKTFCIPHGGGGPGVG
PVAVRQHLAPYLPSHPMHPEHPKREGIGAISAAPYGSAGVLPISWAYVRLMGAAGLATAT
SVAVLAANYVAARLDEHFPVLYRGHNGLVAHECILDLRGLTKDTGVTVDDVAKRLIDYGF
HAPTMSFPVAGTLMVEPTESEDLAELDRFVAAMIAIRGEIDRVAAGEWSAEESPLRHAPH
TGRALVGDWDRDYPRELGAYPAGIDADKYWPPVARVDQAYGDRNLVCACPPPEAFA
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgaccaccccagcctgagggcgctcgacgccgcgtcgcccttcctcgaccgccac
ctcggtccacggcccgacgacatcgagcggatgctccagacgctcgggtacgcctcgctc
gacgccctcatggaagcagccgtgcccggcgccatccgcagcgccgaggacctcgcgctg
cccgacgccgccgacgagtcgaccgtggcgcgtgagctgcgcgccctcgctgcccagaac
cgccccgcggagtcgatgatcggcctgggctaccacccgacgatcacgccgcccgtcatc
cggcgcaacgtgctggaggaccccagctggtacaccgcctacacgccctaccagcccgag
atctcccagggcaggctcgaggcactgctgaacttccagacggtcgtgggcgacctgacc
ggcctgccgaccgccaacgcgtcgctgctcgacgagggcacggccgcggccgaggcgatg
acgctcgtgcgtcgcgccaagcggtcggcgagcggcccgttcgtgctggacgcggacgcg
ctgccgcagaccatcgacgtggtccggacccgcgccgaggcgatgggcatcgaggtcgtc
gtcgccgatctcgacgggggactgcccgacggcgacctgtgtggcgtgctggtccagtac
cccggcgccgagggcagggtccgcgacccgcggccgctgatcgaggccgcccacgaccgg
ggtgcgctcgccgtggtcgccgccgacctgctggccctcaccctgctcgaggcgcccggc
gagctgggtgccgacgtggtcgtcgggtcctcgcagcgcttcggggtgcccctgttctac
ggcggcccgcacgccggctacatggcggtcggccccggcctcgagcgacacctgcccggg
cgcctggtgggcgtctcggtcgacgccgagggacgccctgcctaccggctggccctccag
acccgcgagcagcacatccgccgcgacaaggcgacctccaacatctgcaccgcccaggtg
ctgctggccgtcgtcgcctccatgtacgccgtctaccacggccccgaggggctgcgggcg
atcgccacccgggcccaccgctacgccgccgtcctcgccgccgccctgcgccaggccggt
cacgtcgtcgagaccgacgagttcttcgacaccatcgtggtccgcgcggagggccgcgcc
gccgaggtggtggccgctgcccgcgaggacggcatccacctgcgcctcgtcgacgacgac
cggatcggcatctcgacctcggagagcacgaccctcgcgaccctgcagtcggtgctgggg
gccttcggggaggaggaggcgaccgacctggaggcgctcgaccaggccaccggcgacgcg
atcccggaggccctgcggcgcaccaccccctacctcacccacgaggtcttctcgacccac
cacagcgagacggccatgctgcgctacctgcgacggctctccgaccgtgactacgccctc
gaccgcggcatgatcccgctcggctcctgcacgatgaagctcaacgcgaccaccgagatg
gagcccgtctccctgccggggttcgccgacctgcacccgttcgcgcccgccgacgacgcg
atcggctaccgcgagctggtggcgcagctcgaggactggctcgcgacggtcaccggctac
gaccgggtgtcgatccagcccaacgccggctcccagggcgagctggccgggctgctggcc
atccgcggctaccaccgggcgcgcggcgacgagcagcgcgacgtctgcctgatcccgtcc
tcggcccacggcaccaacgccgcctccgcggtcatggccgggatgcgggtcgtggtggtg
aaggcggccgacgacgggtcggtggacctcgacgacctccaggcgaagtgcgaggagcac
gccgccgacctcgccgccatcatggtgacctacccctccacgcacggggcctacgaggac
ggaatcacccgcctctgcgaggtcgtccacgagcacggcgggcaggtctacgtcgacggc
gccaacctcaacgcactgctcggtcacgcgcgaccgggcgagttcggcggcgacgtctcc
cacctcaacctgcacaagaccttctgcatcccgcacggcggcggcgggcccggggtcggg
ccggtggccgtgcgccagcacctggcgccgtacctgccctcgcacccgatgcaccccgag
caccccaagcgcgagggcatcggcgccatcagcgcggcgccgtacgggtccgccggcgtc
ctgccgatctcgtgggcctacgtcaggctgatgggcgcggccgggctggccacggcgacc
tcggtcgccgtgctggcggccaactacgtcgcggcacggctcgacgagcacttcccggtg
ctctaccgcggacacaacgggctggttgcccacgagtgcatcctcgacctccgtggcctc
accaaggacacgggtgtcaccgtcgacgacgtcgccaagcggctcatcgactacggcttc
cacgcgccgaccatgtccttcccggtggccggcaccctcatggtcgaaccgaccgagtcc
gaggacctcgccgagctcgaccggttcgtggcggcgatgatcgcgatccgtggcgagatt
gaccgggtcgccgcgggggagtggagcgccgaggagtccccgctgcgccacgcgccccac
accgggcgggcgctcgtcggtgactgggaccgcgactacccccgcgagctgggggcctac
ccggcgggcatcgacgcggacaagtactggccacccgtcgcgcgggtcgaccaggcctac
ggcgaccgcaacctggtctgcgcctgcccgccgccggaggcgttcgcgtag
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