Nocardioides coralli: K6T13_10585
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Entry
K6T13_10585 CDS
T08149
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ncq
Nocardioides coralli
Pathway
ncq03030
DNA replication
ncq03430
Mismatch repair
ncq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ncq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K6T13_10585 (dnaE)
03430 Mismatch repair
K6T13_10585 (dnaE)
03440 Homologous recombination
K6T13_10585 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ncq03032
]
K6T13_10585 (dnaE)
03400 DNA repair and recombination proteins [BR:
ncq03400
]
K6T13_10585 (dnaE)
Enzymes [BR:
ncq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K6T13_10585 (dnaE)
DNA replication proteins [BR:
ncq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K6T13_10585 (dnaE)
DNA repair and recombination proteins [BR:
ncq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K6T13_10585 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
OB_MCM10
HHH_3
MamS_MamX
Motif
Other DBs
NCBI-ProteinID:
QZY27945
LinkDB
All DBs
Position
complement(2170755..2174315)
Genome browser
AA seq
1186 aa
AA seq
DB search
MAGSSSDSFAHLHVHTEYSMLDGAARLDDLFRRTAELGMGSIAMTDHGNVFGAYEFWSKA
KAHGVKPIIGMEAYFTPNTSRFEKKRVRWNDGGQDDVSGSGSYTHMTLLAENTTGMHNLF
RLSSRASMEGYFYNARADRELLAEHGEGLIGTTGCPSGEVQVWLRIGDYEKARQAAGDFQ
DILGRDNYFLELMDHGLGIENRVRDGLLRLSKDLGIPPIATNDSHYVLKEHAASHEHLLC
VSSGSVMSEPPYEKGGKRFAFQGDGYYIKSAAEMRELWGERNGLPEACDNTLLIAERCDV
SFSEGNGTFMPRFPCPPGENEDSWLVKEVDRGLLARYPGGVPDVVRRQADYEIGVITQMG
FPGYFLVVADFINWAKDNGIRVGPGRGSGAGSMVAYALRITELDPLEHGLIFERFLNPDR
VSMPDFDIDFDERRRGEVIKYVTEKYGDDRVSYIVTYGTIKAKQAVKDSSRILGYPFAMG
DRITKAMPPAVMGKDVPLKGLFDPAHGRFGEGGEFRALYDSDGDVKTVVDTAIGLEGLKR
QWGVHAAGIIMSSEPLLDVIPLMKRPADGAIITQFDYPTCESLGLIKMDFLGLRNLTVLD
DAVKNVEANRGEVLVLEDLPLDDQPSYQLLGTGNTLGVFQLDGGPMRGLLRLMRPDNFED
ISAVLALYRPGPMGVDSHTNYALRKNGKQEITPIHPELEEPLEEILGTTYGLIVYQEQVQ
KVAQKVAGYSLGQADLLRRAMGKKKKEVLDAEYVPFSEGMRANGYSDRAIKALWDVLVPF
SDYAFNKAHTAAYGLISYWTAYLKAHYPAEYMAALLTSVKDDKDKMAIYLNECRRMKIKV
LPPDVNESQATFTPVGDDIRFGLTAIRNVGSNVVAAIVEAREEQGRYTDFNDFMGKVPAL
VCNKRVIESLVKAGAFDDMKHHRRALVHVHETAVDQYVDIKRNEAIGQDSLFDGLGDDGD
SGFGIAVTIPDIDEWDKMTLLGHEREMLGLYVSDHPLLGLEHVLSKGTDCTIGQLMLDED
RADGSPITISGLVTGVQRKITKRGDTWAMVTLEDLDGAIDVLLFPSAYQLASTLLTEDAI
LTIRGRLSRSKDQPEIHAQEVTVPDLSDGPSGPVVVSLPSTRCTAPVVDHLKEVLGSHPG
VTEVHLRLLSRGTTTLLRLDDRLRVSPTPALFADLKQLLGPGCLQS
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atggccggctcgtccagcgactccttcgcgcacctccacgtccacaccgagtactccatg
ctcgacggcgcggcgcggctcgacgacctcttccggcggacggctgagctggggatgggc
tccatcgccatgaccgaccacggcaacgtgttcggggcctacgagttctggtccaaggcc
aaggcccacggggtcaagccgatcatcggcatggaggcctacttcacccccaacacctcc
cgcttcgagaagaagcgggtgcgctggaacgacggcggccaggacgacgtgtcggggtcg
ggctcctacacccacatgacgctgctcgccgagaacaccacgggcatgcacaacctgttc
cgcctcagcagccgggccagcatggagggctacttctacaacgcccgggccgaccgggag
ctgctcgccgagcacggcgagggactgatcggcaccaccggctgcccctccggcgaggtc
caggtctggctgcggatcggcgactacgagaaggcgcgccaggcggccggcgacttccag
gacatcctcggccgggacaactacttcctcgagctcatggaccacgggctcggcatcgag
aaccgggtgcgcgacggcctgctccggctgagcaaggacctcggcatcccaccgatcgcc
accaacgactcccactacgtgctcaaggagcacgccgcctcccacgagcacctgctgtgc
gtctcctccggcagcgtgatgagcgagccgccctacgagaagggcggcaagcggttcgcc
ttccagggcgacggctactacatcaagtccgccgccgagatgcgcgagctgtggggtgag
cgcaacgggctgcccgaggcctgcgacaacacgctgctgatcgcggagcggtgcgacgtc
tccttcagcgagggcaacggcaccttcatgccgcgcttcccgtgcccgccgggggagaac
gaggactcctggctggtcaaggaggtcgaccgggggctgctggcccgctacccgggcggt
gtccccgacgtcgtacgccgccaggccgactacgagatcggcgtcatcacccagatgggc
ttcccgggctacttcctggtcgtcgccgacttcatcaactgggccaaggacaacgggatc
cgggtcggtcccgggcggggttcgggggccggctcgatggtcgcctacgcgctgcggatc
accgagctcgacccgctcgagcacggcctgatcttcgagcgcttcctcaaccccgaccgc
gtctcgatgcccgacttcgacatcgacttcgacgagcgtcgccggggcgaggtcatcaag
tacgtcaccgagaagtacggcgacgaccgggtctcctacatcgtcacctacggcacgatc
aaggcgaagcaggccgtcaaggactcctcgcggatcctcggctacccgttcgccatgggt
gaccggatcaccaaggcgatgcccccggcggtgatgggcaaggacgtccccctcaagggc
ctgttcgaccccgcccacggacggttcggcgagggcggtgagttccgggctctctacgac
agcgacggcgacgtcaagacggtggtcgacaccgccatcggcctcgaggggctcaagcgg
cagtggggcgtccacgccgccggcatcatcatgtcgagcgagccgctgctcgacgtcatc
ccgctgatgaagcggccggccgacggcgccatcatcacccagttcgactacccgacgtgc
gagtcgctgggcctgatcaagatggacttcctcgggctgcgcaacctcacggtcctcgac
gacgcggtgaagaacgtcgaggccaaccgcggtgaggtgctggtcctggaggacctgccc
ctcgacgaccagccctcctaccagctcctcggcaccggcaacacgctcggcgtcttccag
ctcgacggcggcccgatgcgtggcctgctgcgcctcatgcggcccgacaacttcgaggac
atctcggccgtcctggccctctaccgtcccggcccgatgggcgtggactcccacaccaac
tacgccctgcgcaagaacggcaagcaggagatcacgccgatccaccccgagctcgaggag
ccgctcgaggagatcctcggcacgacgtacggactgatcgtctaccaggagcaggtccag
aaggtcgcccagaaggtcgcgggctacagcctcggccaggccgacctgctccgccgcgcc
atgggcaagaagaagaaggaggtgctcgacgccgagtacgtccccttctccgagggcatg
cgggccaacggctactccgaccgcgcgatcaaggcgctgtgggacgtgctggtcccgttc
tccgactacgcgttcaacaaggcgcacaccgcggcctacggcctgatctcctactggacc
gcctacctcaaggcgcactacccggccgagtacatggccgcgctcctgacgtccgtcaag
gacgacaaggacaagatggccatctacctcaacgagtgccgccggatgaagatcaaggtg
ctcccgcccgacgtcaacgagtcgcaggcgaccttcacgccggtcggcgacgacatccgc
ttcgggctgaccgccatccgcaacgtcgggagcaacgtcgtcgcggcgatcgtcgaggcc
cgggaggagcagggccgctacaccgacttcaacgacttcatgggcaaggtgccggcgctg
gtctgcaacaagcgcgtgatcgagtcgctggtcaaggccggtgcgttcgacgacatgaag
caccaccgtcgtgccctggtccacgtccacgagacggccgtcgaccagtacgtcgacatc
aagcgcaacgaggcgatcggtcaggactcgctcttcgacggcctcggcgacgacggcgac
tcgggcttcgggatcgcggtgacgatccccgacatcgacgagtgggacaagatgaccctg
ctgggtcacgagcgcgagatgctcggcctctacgtctccgaccacccgctgctcggactc
gagcacgtgctgtccaagggcaccgactgcaccatcgggcagctgatgctcgacgaggac
cgtgccgacggcagcccgatcaccatcagcgggctcgtcaccggcgtccagcgcaagatc
accaagcggggtgacacctgggcgatggtcacgctggaggacctcgacggcgcgatcgac
gtgctcctgttccccagcgcctaccagctcgccagcacgctgctcaccgaggacgcgatc
ctgaccatccgcggccggctgtcccgcagcaaggaccagcccgagatccacgcgcaggag
gtcaccgttcccgacctgagcgacggtcccagcggcccggtcgtggtgagcctgccctcg
acgcggtgcaccgctcccgtcgtcgaccacctcaaggaggtcctcggcagccacccgggc
gtgacggaggtccacctgcggctgctctcccgggggacgaccaccctgctccgcctcgac
gaccgcctgcgggtctcgcccacaccggccctgttcgccgatctcaagcagctgctgggg
cccgggtgtctgcagagctga
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integrated database retrieval system
