Nocardioides coralli: K6T13_11335
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Entry
K6T13_11335 CDS
T08149
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ncq
Nocardioides coralli
Brite
KEGG Orthology (KO) [BR:
ncq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ncq03016
]
K6T13_11335 (truB)
Enzymes [BR:
ncq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
K6T13_11335 (truB)
Transfer RNA biogenesis [BR:
ncq03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
K6T13_11335 (truB)
Prokaryotic type
K6T13_11335 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
TruB-C_2
NNH6
Motif
Other DBs
NCBI-ProteinID:
QZY28084
LinkDB
All DBs
Position
complement(2319444..2320307)
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AA seq
287 aa
AA seq
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MTDAPGLVVVDKAGGMTSHDVVSRVRRLAGTRKVGHAGTLDPMATGVLVLGVNRATRLLG
HLLLTDKRYDATVRLGVTTTTDDADGEVVVTAPVDHLDESAVRAAFADQVGELDQVPSSV
SAVKVDGRRAYQRVREGEEVELAPRRVTVHELVVRDVRDGEVDVSVRCSSGTYIRAIARD
VGVALGVGGHLTALRRTAVGPFDLTHARTLEEHAEAFGLIPIEDAARVAFPAYDLDDVQA
ADVRHGRRLRAALPAAGPVAVFAPDGAFLALYAQEGDVARAVAVFTG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacgcacccggcctggtcgtcgtcgacaaggccggcgggatgacctcccacgac
gtggtctcgcgggtccggcgactcgccggcactcgcaaggtgggccacgccggcaccctg
gaccccatggccaccggcgtgctggtgctgggcgtcaaccgcgccacccggctgctggga
cacctgctcctcaccgacaagcggtacgacgccacggtccggctcggcgtcacgaccacg
accgacgacgcggacggcgaggtggtggtcacggcacccgtcgaccacctcgacgagtcc
gccgtccgggccgccttcgcggaccaggtcggagagctcgaccaggtgccgtcgtcggtc
tcggcggtcaaggtcgacggacgacgcgcctaccagcgggtgcgtgagggcgaggaggtc
gagctcgccccgcgacgggtgacggtccacgagctggtcgtccgcgacgtgcgcgacggg
gaggtcgacgtctcggtgcggtgctccagcggcacctacatccgggcgatcgcccgagac
gtcggggtggcgctgggcgtggggggccacctgaccgcactgcggcgcacggcggtgggt
ccgttcgacctgacgcacgcgcggaccctcgaggagcacgcggaggcgttcgggctcatc
ccgatcgaggacgcggcccgggtcgcgttcccggcgtacgacctcgacgatgtgcaggcc
gccgacgtccggcacggtcgacggctccgcgccgcgctccccgccgcgggtccggtcgcg
gtgttcgcacccgacggggccttcctggcgctctacgcacaggagggggacgtcgcccgt
gccgtcgcggtcttcaccggctga
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