Nocardioides coralli: K6T13_14555
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Entry
K6T13_14555 CDS
T08149
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
ncq
Nocardioides coralli
Pathway
ncq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ncq00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
K6T13_14555
09124 Replication and repair
03420 Nucleotide excision repair
K6T13_14555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncq03021
]
K6T13_14555
03400 DNA repair and recombination proteins [BR:
ncq03400
]
K6T13_14555
Enzymes [BR:
ncq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K6T13_14555
Transcription machinery [BR:
ncq03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
K6T13_14555
DNA repair and recombination proteins [BR:
ncq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
K6T13_14555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
QZY28667
LinkDB
All DBs
Position
2961573..2963207
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AA seq
544 aa
AA seq
DB search
MNAGPLIVQSDKTLLLEVDHEQAADCRRAIAPFAELERSPEHIHTYRLTPLGLWNARAAG
HDAEQVVDTLLTYSRFAVPHALLVDVAETMARYGRLRLDKHPTHGLVLVTTDRPVLEEVL
RAKRVAGMLGARLDDDTVAVHPSERGNLKQALLKLGWPAEDFAGYVDGEAHPIELAEDGW
SLRGYQREAAESFWHGGSGVVVLPCGAGKTLVGAAAMAHAQATTLILVTNTVSARQWKDE
LVRRTSLSEEEIGEYSGQVKEIRPVTIATYQVMTTRRKGVYPHLELFDARDWGLIVYDEV
HLLPAPIFRMTADLQARRRIGLTATLVREDGREGDVFSLIGPKRYDAPWKDIESQGWIAP
ADCVEVRVTMPESERITYATAELEERYRLSACTPAKTRVAERLVEQHAGEPTLVIGQYLE
QLDEIGADLDAPVIKGDTPVKERQRLFDAFRAGEISLLVVSKVANFSIDLPEAAVAIQVS
GSFGSRQEEAQRLGRLLRPKADGRTARFYAIVSRDTVDADFAANRQRFLAEQGYAYRIVD
AADL
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
gtgaatgcgggccccctcatcgtccagtcggacaagacgctcctgctcgaggtcgaccac
gagcaggcggcagactgccgccgcgcgatcgcgcccttcgccgagctcgagcggtcgccc
gagcacatccacacctaccggctgacgccgctcggcctctggaacgcgcgggccgcgggc
cacgacgccgagcaggtggtcgacactctgctgacctacagccggttcgcggtgccgcac
gcgttgctggtcgacgtcgcggagaccatggctcgttacggtcggctgcgcctggacaag
caccccacccacggcctggtgctggtcacgacggaccgccccgtcctcgaggaggtgctg
cgcgccaagcgggtcgccggcatgctcggcgctcgcctggacgacgacaccgtcgcggtc
catcccagcgagcggggcaacctcaagcaggcgttgctcaagctcggctggccggccgag
gacttcgccgggtacgtcgacggcgaggcccacccgatcgagctggccgaggacggctgg
tcgctgcgcggctaccagcgcgaggcggccgagtcgttctggcacggcggctcgggcgtc
gtcgtgctgccgtgcggcgccggcaagacgctggtcggcgctgccgcgatggcccacgcg
caggccaccacgctgatcctcgtcaccaacacggtctcggcccggcagtggaaggacgag
ctggtgcggcgtacctcgctctccgaggaggagatcggcgagtactccgggcaggtcaag
gagatccgaccggtcaccatcgcgacgtaccaggtgatgacgacgcgacggaagggcgtc
tacccccacctcgagctcttcgacgcccgcgactgggggctcatcgtctacgacgaggtg
cacctgctgccggccccgatcttccggatgaccgccgacctgcaggcacggcgccggatc
gggctgacggcgacgctggtgcgcgaggacggccgtgagggcgacgtcttctcgctgatc
gggccgaagcgctacgacgccccgtggaaggacatcgagtcgcagggatggatcgcgccg
gccgactgcgtcgaggtgcgggtgacgatgcccgagtcggagcggatcacctacgccact
gccgagctcgaggagcgctaccggctctcggcgtgcacgccggccaagacccgggtcgcc
gagcgtctggtcgagcagcacgccggcgagccgacgctggtgatcgggcagtacctcgag
cagctcgacgagatcggggccgacctcgacgcaccggtgatcaagggcgacaccccggtc
aaggagcggcagcggctcttcgacgccttccgcgccggcgagatctcgctgctggtcgtc
agcaaggtcgccaacttctccatcgacctccccgaggcggcggtcgcgatccaggtctcg
gggtccttcggctcccgccaggaggaggcacagcgactgggccggctgctccgacccaag
gccgacggccggacggcccggttctacgcgatcgtctcccgcgacacggtcgacgcggac
ttcgccgccaaccggcagcgcttcctcgccgagcagggctacgcctaccggatcgtggac
gccgccgacctctga
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