Neurospora crassa: NCU00901
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Entry
NCU00901 CDS
T01034
Symbol
uvs-6
Name
(RefSeq) ultraviolet-sensitive-6
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
ncr
Neurospora crassa
Pathway
ncr03440
Homologous recombination
ncr03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ncr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NCU00901 (uvs-6)
03450 Non-homologous end-joining
NCU00901 (uvs-6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ncr03032
]
NCU00901 (uvs-6)
03400 DNA repair and recombination proteins [BR:
ncr03400
]
NCU00901 (uvs-6)
DNA replication proteins [BR:
ncr03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
NCU00901 (uvs-6)
DNA repair and recombination proteins [BR:
ncr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
NCU00901 (uvs-6)
BRCA1-C complex
NCU00901 (uvs-6)
NHEJ (non-homologous end-joining)
MRX complex
NCU00901 (uvs-6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_21
SbcC_Walker_B
SMC_N
HAUS-augmin3
AAA_29
AAA_13
AAA_15
ABC_tran
AAA_16
Motif
Other DBs
NCBI-GeneID:
3879967
NCBI-ProteinID:
XP_963818
UniProt:
Q7RVZ9
LinkDB
All DBs
Position
I:6820468..6825018
Genome browser
AA seq
1314 aa
AA seq
DB search
MSKLEKMSILGVRSFGPRHPEAIAFNTPLTLIVGYNGSGKTTIIECLKYATTGELPPNSK
SGAFIHDPNLVGEKDVQAQIKLSFRSTVGESFVVTRNVQLAVTKTSSKQKTLEGSLLLRA
NGDRQVLSTRVVDLNKLVPEKLGVSPAVLDAVIFCHQDESLWPMSPGADLKKRFDEIFEA
KKYAKVIDNIKLLRKTKGEELRLLRMQEAQDKENKERADKVDRELSKLIRELQEDRDKCN
ELQKQIEDEDVRIKQKWEQANSFLKIVNELQTKQEKLEYKKDAIAELRERIEESTESDEY
LRDVLSQYEQTVKRMNSDRDQKVAQFGTLQTELKTARAKHTAKVEEQGKHQSDKEKYDRQ
LVSQRQMIQEAAEKHEIRGYDGDLDDQEINAFYERIQKMLQDTKRDLERLQRDNAAELDA
KSATITELESHKASRIRDRKISSQRVATLQRDITKLQGELNNLDVDEGAEAVLQTEMEGL
ESKIKAAKADNRVSELDSQITKLNNEVLTLEAQGAQLSRELVECTNLASERAQLELRKKQ
LTERKRELDILKNTFNQQLTDVVGRNWTPETIESDFQKALRQLSDRLSELRKTKDSTQQE
LKQVEYKLTTAREQQIKSVKERDSCKKDVLEALKKVPRQNKPVTESVDDYPDAVKEIEKL
LKDTDTDLELNMYLKEYFLKAKVKAEEKHKCYLCEQSLGDEKTMKRLMKRIQDKIDDKDR
DELLEDQALYGRHLGTLRSVRTKHETYGRLCKELPSMVEEINSLTLQKERLVRQLEDQDG
AFKIAEEKRNAADVLSKSVLKIAQTVKDIADSERHIERAQQNSSNQVRSADEINDDQTTC
AEQLRIAQAKLSKSTAERQRLKDLAAQLEVEKLELKHKITEAVQKLEHKKRLQDTIKNHR
DEQSELRKNMQDIDKEVEGIDPEIASARAALEESRKQGRAREQRIAEERDGIATTVSELK
IINREIQDYLDRGGPANLASNQRTIASLESTIAALEKEMKDVTIQINKLNKEIDNSDAKR
RNIADNLTYRKNLRERDALEEEIEELESRNAQEDYDRLVEEAHSFELYRGKLNAERQRLM
GSMSTKDEQFRRLEEEYEIELKGARARYKESHIKVETTKAAIEDLAQGNMALDHAIMQYH
SLKMEEINRTIADLWQSTYQGTDIDTIQIRSYMESTASGATNTRRVYNYRVSMIKGDTEM
DMRGRCSAGQKVLACIIIRLALAESFGANCGMIALDEPTTNLDSDNIRSLAESLHAIIKA
RRSQNNFQLIVITHDEEFLKHMQCSDFCDSFFRVKRDENQNSVITRESITRISE
NT seq
3945 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagctcgagaaaatgtccatcttgggcgtgcgctcctttgggccacgccaccca
gaggccatcgctttcaacaccccattgaccctcatcgtcggttacaatggctcgggcaag
accaccatcatcgaatgtctcaaatacgctactactggcgagcttccgcccaacagcaaa
agcggggctttcatccacgaccctaacctcgttggcgagaaagatgtacaagctcagatc
aagctttccttccgctccactgttggtgaatccttcgtcgtgactagaaacgtgcagttg
gccgtcacgaagacctcaagtaaacaaaagaccctcgaaggaagtctcctgttacgagcc
aatggcgatcgccaagtattgtctaccagagtagtggatctcaacaagctcgttcccgag
aaactgggcgtttcaccagctgtcctagatgcggttatcttttgccatcaggatgagtcc
ctctggcccatgagcccgggggctgacctgaaaaagaggttcgatgaaatctttgaggcc
aaaaagtacgccaaagtcatcgataatatcaagcttctccgaaagaccaagggcgaagag
cttcgactactcaggatgcaagaggctcaagataaggagaacaaggagagggcggacaag
gtcgacagagagctgagtaagcttattcgcgagctacaagaggatcgcgacaagtgcaac
gaactgcaaaaacaaatcgaggatgaggatgttcgaattaagcaaaaatgggagcaggcc
aacagtttcctcaagatcgtcaacgagctacagactaaacaggagaaactcgaatacaaa
aaggatgccatcgcagagttgcgcgaacgcatcgaggagagcacagagtctgatgaatat
cttcgtgacgttctcagccagtacgaacaaactgttaagcgaatgaacagcgaccgagat
cagaaggtggcccaatttggcaccctacagacggagctcaagaccgcccgagccaagcat
accgctaaggtggaggagcagggaaagcatcagtctgacaaggaaaagtatgaccgccaa
ctcgtttcgcaacgtcagatgatccaagaagcagctgaaaaacacgagattcgtggctac
gacggtgacttggatgaccaggagatcaatgcattttacgaacgcatccagaaaatgctt
caagacacaaaacgagacctggaacgtctacaacgcgacaatgccgccgaactggacgca
aaatccgccaccatcacggagctagagagccacaaggcgtcccgcattcgagaccggaag
atctcttcacagcgggttgcgacacttcagagagatattaccaaacttcaaggagaactg
aacaatctcgatgttgacgaaggcgcggaagcagtactacagaccgagatggaggggctg
gagtccaagatcaaggcagcgaaagctgacaacagagtgtcagaacttgattcacagatc
acaaagctgaacaacgaggtcttgactctagaagctcagggtgcccagctaagtcgggaa
ttggttgaatgcaccaacctagcatccgaacgtgcacaactcgaacttcgtaaaaagcag
ctcacagaacggaagcgagaactagacattctgaagaacacattcaatcagcagcttacc
gatgttgtcggcagaaattggacaccggaaaccattgagtcagattttcaaaaagccctt
cgacagctgagtgaccgactatctgagcttagaaagacgaaggattcgacgcagcaagaa
ctgaagcaggttgagtacaagcttaccactgctcgtgagcaacaaatcaagtccgtaaag
gaaagggatagctgcaaaaaagacgttctcgaagccctgaagaaggtgccgcgtcaaaat
aagccggtgacggagtcggtagatgattatccagatgctgtcaaagagatcgagaaattg
ttgaaggataccgacacggacctggaactcaatatgtatctgaaagaatacttcttaaaa
gcgaaggttaaggcagaggaaaagcacaaatgctacctctgtgagcaatcgcttggcgac
gagaaaaccatgaagcgattgatgaagaggattcaagataagattgatgacaaagataga
gacgagctgcttgaggatcaagccttgtacggacgtcaccttggaacactgagaagtgtg
cggacgaagcacgaaacatatggacggttgtgtaaggagctgccgtccatggtcgaagaa
atcaactcgctcacgcttcagaaggaaagactggttcgacagcttgaagaccaggatggc
gctttcaaaattgccgaagagaagcggaatgcggcggatgtgctgagcaagagcgtactg
aaaattgcgcagactgtcaaggatattgcggattccgagagacacatcgagagagcacag
cagaattcgagcaatcaggtgcgcagtgctgacgagattaacgatgaccaaacaacctgt
gcagagcagttaagaattgcccaagccaagttgagcaagtcaaccgccgaacgacaacgg
ttgaaggacctggccgctcagctcgaggttgagaaattggagttgaagcacaaaatcacg
gaggccgtccagaaattagaacacaagaagcgtctccaggacacgattaagaatcacaga
gacgagcagagcgaacttcgcaaaaacatgcaagacattgacaaagaggtcgagggcatc
gacccagaaatcgccagcgcaagagccgcgctcgaggaatctcggaagcagggccgtgct
agagagcagaggatcgcagaggaacgtgatggaatcgccactacggtgagcgagctcaag
ataatcaaccgcgaaatccaggattatctcgaccgaggaggtcctgccaaccttgcttcc
aaccagcggaccattgccagcctggagagcaccatcgctgccctcgagaaagagatgaaa
gacgtcaccattcagatcaacaagctgaacaaggagatcgataatagcgacgccaagagg
cgcaacatcgccgacaacctcacataccgcaagaacctgcgcgagcgcgatgctctcgag
gaagaaatcgaagagctcgagtcccgcaacgcacaagaggactacgaccgtctcgtcgag
gaagcgcactccttcgaattataccgtggcaaactcaacgccgaacgccagcggctcatg
ggctccatgtccaccaaggacgagcagttccgccggctcgaagaggagtacgagattgag
ctcaagggggcgcgcgcccggtacaaagagagccacatcaaagttgagacgacgaaagcg
gccatcgaggacctcgcacagggcaacatggcgctcgaccacgccatcatgcagtaccac
tcgctcaagatggaggagatcaaccggaccatcgccgacctttggcaaagcacgtaccaa
ggaaccgacatcgacacgatccagattcggtcctacatggaatcgacggcttcgggcgcc
accaatacgcgccgcgtttacaattaccgcgtgtccatgatcaagggcgacacggaaatg
gacatgcgtgggcggtgcagtgcgggtcaaaaggtgctggcctgcattatcattcgcctt
gccctggccgagtcgtttggcgctaattgtggcatgattgcgctcgacgagccgacgacg
aatctggatagtgacaatatccgcagtctggcggagagtttgcacgcgatcatcaaggca
aggcggtcacagaacaatttccagctgatcgtgatcacgcatgacgaggagttcttgaag
catatgcagtgcagcgatttctgcgatagtttctttagggtaaagagggatgagaatcag
aatagtgtcattacgagggagagcattacgaggatttcggagtaa
DBGET
integrated database retrieval system
