Neurospora crassa: NCU01160
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Entry
NCU01160 CDS
T01034
Name
(RefSeq) ATP-dependent RNA helicase dbp-5
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
ncr
Neurospora crassa
Pathway
ncr03013
Nucleocytoplasmic transport
ncr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ncr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
NCU01160
03015 mRNA surveillance pathway
NCU01160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncr03019
]
NCU01160
Enzymes [BR:
ncr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NCU01160
Messenger RNA biogenesis [BR:
ncr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
NCU01160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
CMS1
AAA_22
SidM_N
Motif
Other DBs
NCBI-GeneID:
3877706
NCBI-ProteinID:
XP_961526
UniProt:
Q8X0X2
LinkDB
All DBs
Position
V:complement(3084208..3087348)
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AA seq
483 aa
AA seq
DB search
MADLASRITKPDEAPAAAPEAAPVSAPASEEPKAPENETSIEESQSNLVKNEYEVEIKLS
DLQNDTESPLYSVSSFDELGLPEAVNRGLLAINFKKPSKVQEKCLPLMLSDPPRNMIAQS
QSGTGKTAAFVLTVLSRIDLSKPHQPQALLLAPSRELARQIQTVVQTIGQFCENLIVEAA
IPGAISRETGVRGSVVVGTPGTVMDLVKRRQFDISQLKVLVIDEADNMLDQQGLGDQCVR
VKNMLPKTIQILLFSATFPDKVLRFAERFAPNANQMKLKHKELTVKGISQMFMDCPTEKD
KYDILCKLYGLMTIGSSVIFVRTRETANEIQKRMEADGHKVSALHGAYEGQSRDVLLDEF
RSGRSKVLITTNVLARGIDVSSVSMVINYDIPMKGPGEREPDAETYLHRIGRTGRFGRVG
VSISFVHDRRSFEALSQIAQFYGIDLIQLNPNDLDDTERKVQEVIKSSRAQAEYVPSATD
SAV
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggctgatctcgccagccgcatcaccaagcccgacgaggctccggctgccgcccccgag
gctgcgcccgtgtctgcccctgcgtccgaagagcccaaggcccccgagaacgagacctcc
atcgaggagagccagagcaaccttgtcaagaacgagtacgaagtcgagattaagttgagc
gatcttcagaatgacaccgaaagtcctctctactccgtcagctcgttcgatgagttgggt
ctccccgaggctgtcaaccgcggtctgctcgccatcaacttcaagaaaccttccaaggtc
caggagaagtgccttcctctcatgctctccgaccctccccgcaacatgattgcccagtct
caatccggtactggaaagactgccgctttcgtccttaccgttctctcccgcatcgacctg
tccaagccccaccagcctcaggcccttctgcttgctcccagcagagagcttgcccgccag
atccagaccgttgtccagaccatcggtcagttctgcgagaatttgattgtcgaggctgct
attcccggtgccatctcgcgcgagacgggtgttagaggcagcgtcgtcgtgggaactccg
ggaactgtcatggaccttgtcaagcgcaggcagttcgatatctcgcagttgaaggttctt
gttattgacgaggccgacaacatgcttgaccagcagggtctgggtgaccagtgtgtccgc
gtcaagaacatgctccccaagaccattcagatcctccttttctctgcgacgttcccagac
aaagttttgagattcgccgagcgcttcgcacccaacgccaaccagatgaagctcaagcat
aaggagcttacggttaaaggtatttcgcagatgttcatggactgtcctaccgagaaggac
aagtacgacattctttgcaagctgtatggtctcatgaccattggttcttccgtcatcttc
gtccggacgagagagacagccaacgagatccagaagcgcatggaagcagatggtcacaaa
gtttcggcccttcacggcgcctacgaaggccaaagccgtgatgttcttctcgatgaattc
cgctccggacgttccaaggtcctcatcaccaccaacgttctggcacgtggtattgatgtt
tccagtgtgtccatggtcattaactacgacattccgatgaagggacctggcgaaagggag
ccggacgcagagacataccttcaccgtattggtcgtaccggtcgtttcggtcgtgttggt
gtctcgatcagctttgtccacgaccgtaggagcttcgaagcgctctcccagatcgctcag
ttctacggaatcgaccttatccagctgaatcccaacgacctggatgataccgagaggaag
gtgcaagaagttatcaagtcgagcagggcccaagcggagtacgttcccagcgctactgat
tcggccgtttag
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