Neurospora crassa: NCU01236
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Entry
NCU01236 CDS
T01034
Name
(RefSeq) GIY-YIG catalytic domain-containing protein
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
ncr
Neurospora crassa
Pathway
ncr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ncr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
NCU01236
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncr03400
]
NCU01236
DNA repair and recombination proteins [BR:
ncr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
NCU01236
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLX1_C
GIY-YIG
zf-HC5HC2H_2
zf-HC5HC2H
PHD_Oberon
Prok-RING_1
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
3877750
NCBI-ProteinID:
XP_961602
UniProt:
Q9P737
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All DBs
Position
V:3312443..3313883
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AA seq
402 aa
AA seq
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MSTTTTQIQPKPIPALYTVYILRSQPRHASLYIGSTPHPPRRLSQHNGLAKGGAYRTSKI
SLRPWNMVCLVSGFPSMIAALKFEWALNNPHKSLHIPAEKRAEAVKGLGRRKTGHLKRPR
KSLVGVMEALRMLVGVRSFGRWPLRVHFFEEDVWRVWERGGWKAKSGGGGVGELGDLKVE
VVTDFGSPTAPQGAGVIGMGEEAENDPHDDDDGDDAQDENKHGIYALPLDYAPIKDYVAK
SQEIWEFERQGSCVVCKEAMVAGRGLYAICPNTSCEAVGHLDCWSRCLLKQETRRMKIDE
GDEILPVKGECPKCHGEVLWGDMMKELTLRIRGQAEVEKLLKKKKRRRAAKGKEKGKGKV
ADEKGNNAEGRNTKGNREVKTTPQRVVEDSEDSEFLDIACLQ
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccaccaccacccaaatccaacccaaacccatccccgccctctacacagtctac
atcctccgctcccagccccgacacgcttccctctacatcggctccacgcctcacccaccc
cggcgcctctcacaacacaacgggctcgccaagggtggcgcctatcgcacttcgaaaata
tctcttcggccatggaacatggtctgtctggtctccggttttccgagcatgattgccgcg
ctgaaatttgaatgggcgctgaataacccacacaagtcgctgcatatccctgccgaaaaa
agggccgaggcagtgaagggactggggaggaggaagacgggacacctgaaaaggccgagg
aagagtttggtgggggtgatggaggctttgaggatgttggtgggggtgagaagctttggg
aggtggcctttgagggtgcatttctttgaggaggatgtttggagggtctgggagagaggt
ggttggaaggctaagagtggcggtggaggggtgggagagctgggagacttgaaggtagag
gtggttacggactttggcagtccgacggcgccacaaggggcgggcgtgattgggatgggg
gaagaagctgagaatgacccgcacgatgacgacgacggcgacgacgcgcaagatgagaac
aaacatgggatctatgctttaccgctcgattacgcgccgataaaagactatgtggccaag
agtcaggagatttgggagtttgagaggcaggggagctgtgtggtgtgtaaggaagctatg
gtggcgggaagggggttatatgcgatctgcccgaatacaagctgtgaggctgtaggacac
cttgactgttggagccggtgtctcctgaagcaagaaacaaggaggatgaagatcgatgaa
ggggatgagatacttccagtgaagggagagtgtccaaagtgtcacggcgaggttctttgg
ggagatatgatgaaggagttgacattgaggatcagggggcaggcagaggtggagaagctg
ctgaagaagaagaagaggcgaagggcagcgaagggcaaagagaagggcaaagggaaggtc
gctgatgagaaagggaacaatgctgaggggagaaatacaaaagggaatcgagaggtgaag
acgacgcctcagagggtcgtggaggatagcgaagacagcgagtttctcgatatcgcgtgc
cttcagtag
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