Neurospora crassa: NCU01369
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Entry
NCU01369 CDS
T01034
Name
(RefSeq) ATP-dependent RNA helicase ded-1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
ncr
Neurospora crassa
Brite
KEGG Orthology (KO) [BR:
ncr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncr03019
]
NCU01369
03041 Spliceosome [BR:
ncr03041
]
NCU01369
03036 Chromosome and associated proteins [BR:
ncr03036
]
NCU01369
Enzymes [BR:
ncr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NCU01369
Messenger RNA biogenesis [BR:
ncr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
NCU01369
mRNA cycle factors
Common to processing body (P body) and stress granule
NCU01369
Spliceosome [BR:
ncr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
NCU01369
Chromosome and associated proteins [BR:
ncr03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
NCU01369
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Utp25_C
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
3877087
NCBI-ProteinID:
XP_960926
UniProt:
Q9P6U9
LinkDB
All DBs
Position
V:3797944..3801663
Genome browser
AA seq
688 aa
AA seq
DB search
MADQLSSGMGNLSIDQQPPSGPQMGGQGQMRRSYIPPHLRGKMGDAAPPMAGPNGLNNSA
WAGNNNYDARGPGGGGNWPAPGGPPGPGFEGQQGAGWGGPRPQGGFNPNAYRGNAGAGAG
AGAGGGGGSFSNRGSGDGQWRDGKHIPGPANPRVERELFGTPDDPSKQHTGINFEKYDDI
PVEASGDNVPEPVLTFSNPPLDNHLISNIQLARYNVPTPVQKYSIPIVMGGRDLMACAQT
GSGKTGGFLFPILSQSFHTGPSPIPASAAGAYGRQRKAYPTALILAPTRELVSQIYDEAR
KFAYRSWVRPCVVYGGADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLCNIKYLVLD
EADRMLDMGFEPQIRRIVEGEDMPKVNDRQTLMFSATFPRDIQILARDFLKDYIFLSVGR
VGSTSENITQKVEYVEDIDKRSVLLDILHTHAGGLTLIFVETKRMADSLSDFLINQNFPA
TSIHGDRTQRERERALEMFRNGRCPILVATAVAARGLDIPNVTHVINYDLPTDIDDYVHR
IGRTGRAGNTGIATAFFNRGNRGVVRELLELLKEANQEVPAFLETIARESSFGGGRGGRG
GGRGGGRGRTQTADYRKFGGSGGGGFGGGFGGAPASGGYGGGGYGGGGPPAGGYGGGGGA
GYGGGGGGGGYGGGGYGNPGGAGGQSWW
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcaactcagcagcggcatgggcaacctgtccatcgaccagcagcccccctcg
ggcccccagatgggaggccagggccagatgaggcgctcttacattcctcctcaccttcgc
ggcaagatgggcgacgctgctcctcccatggccggccccaacggtcttaacaacagcgct
tgggctggtaacaacaactatgacgctcgtggcccaggcggcggcggcaactggcccgct
cctggtggtccccctggccctggctttgagggccagcagggcgctggctggggcggccct
cgtcctcagggcggcttcaaccccaacgcgtaccgcggcaacgctggcgctggcgccggt
gccggtgccggtggtggtggcggcagcttcagcaaccgtggctctggcgatggtcagtgg
cgcgatggcaagcacattcctggccctgccaacccccgcgtcgagcgtgagctcttcggt
acccccgacgacccgtccaagcagcacactggtatcaacttcgagaagtacgatgacatt
cccgttgaggcttccggtgacaacgtgcccgagcccgttcttaccttcagcaaccctcct
ctggacaaccacctcatttccaacattcagctcgcccgctacaatgtccccactccggtt
cagaagtactccatccccatcgtcatgggtggccgtgatctgatggcttgcgcccagact
ggttccggcaagactggtggtttcctcttccccattctttctcagtctttccacactggt
ccgtctccgattcccgccagcgctgctggtgcctatggtcgtcagcgcaaggcttacccc
accgccttgatccttgctcccacccgtgagttggtctctcagatctacgacgaggctcgc
aagttcgcctaccgttcgtgggtccgtccttgcgtcgtctacggtggtgccgatatcggc
tcccagcttcgccagatcgagcgcggctgcgatcttcttgttgctactcctggtcgtctt
gtcgatctcatcgagcgtggccgtatctccctctgcaacatcaagtacctcgtccttgat
gaggctgatcgcatgcttgacatgggtttcgagcctcaaattcgccgtatcgttgagggt
gaggacatgcccaaggtcaatgaccgccagactctcatgttctcggccactttcccccgc
gacatccagatcctcgcccgcgatttcctcaaggactacatcttcctgtccgttggtcgt
gttggttccacctctgagaacatcacccagaaggtcgagtacgttgaggatattgacaag
cgttccgtccttctcgacattctccacacccacgccggaggtctcacccttattttcgtt
gagaccaagcgcatggccgattcgctgtccgacttcttgatcaaccagaacttccccgct
acttccattcacggtgaccgcactcagcgtgagcgtgagcgcgctttggagatgttccgc
aacggtcgctgccctattctggttgccactgctgtcgctgctcgtggcttggatattccc
aacgtcacccacgtcatcaactacgatctccctaccgacattgatgactacgttcaccgt
atcggtcgtaccggtcgtgccggaaacactggtattgccaccgctttcttcaaccgtggc
aaccgtggtgtcgtccgcgagcttcttgaactcctcaaggaggctaaccaggaggttcct
gccttccttgagaccattgcccgcgagtcctcgttcggcggtggtcgtggcggtcgtggt
ggtggtcgtggcggcggtcgcggtcgcactcaaactgccgattaccgcaagttcggcggt
tccggtggtggcggcttcggcggtggcttcggcggtgctcccgctagcggcggctacggc
ggcggcggctatggtggtggtggtccccccgccggtggctacggcggtggtggtggtgct
ggctacggcggcggcggtggcggcggcggctatggtggcggcggttacggcaaccctggc
ggtgccggtggccagtcttggtggtaa
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