Neurospora crassa: NCU01539
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Entry
NCU01539 CDS
T01034
Name
(RefSeq) vacuolar morphogenesis protein AvaB
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
ncr
Neurospora crassa
Pathway
ncr04138
Autophagy - yeast
ncr04142
Lysosome biogenesis
ncr04145
Phagocytosis
ncr04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ncr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
NCU01539
04142 Lysosome biogenesis
NCU01539
04138 Autophagy - yeast
NCU01539
04148 Efferocytosis
NCU01539
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncr04131
]
NCU01539
Membrane trafficking [BR:
ncr04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
NCU01539
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
TPR_Vps41
VPS18_solenoid_2nd
Motif
Other DBs
NCBI-GeneID:
3872402
NCBI-ProteinID:
XP_956242
UniProt:
F5HBK9
LinkDB
All DBs
Position
II:3147265..3151235
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AA seq
1138 aa
AA seq
DB search
MLSAFTARPIIELKQRDKSKIESILAYGDRVLVGLNTGSLRIYRVNELPPAPPPPPPPPP
PSQSANGTSSQQLSEATTESTTQDPNGPLTTTQEYQAAAPGFYNAQAAPRGPKPTDLLRE
VEKFSTRAIEQLAIIKEANTIISLSNYNGVALHDLQTFEPIEFPTARTKSASTFAVTSNI
VKDPDTGIPEIISRLAVAVKRRLLLWSWHESELSPDVTEIVLSEAIRSLTWANANKVVCG
MNGGYQIVDITTGQMEDIVGPGAIGAAGGQSRFGATASMGYMGLGNFTPKPLSAKLAEGQ
LLLAKDINTLFINDAGKALEKRQIPWQAAPESIGYSYPYILALQSPTKGSLEVRNPDTLN
LLQTISLPGAASLHFPPPTVSLAHAGKGFHVLSERVVWKMDATDYDSQIDELVKTQRYDE
AISILAMLEDALLKNKTETMREVKMLKAELLFRQRKFRESMDLFNEDEVHAPPERVLRLF
PKIIVGELGVDEKKPEEPQEESDHEAPPNGKANGDHAPKEDEPHSEVSSPQKGGGFAKYL
MGHGRKKFDPETSSIVSSRRAPVDDDAASIKGKTAEEQRAQDEKDLMTAVSELNSYLAGA
RARLQRVIDPVTGKLKPRKSANGVTEEAFNTLLMFHKDEDDEQLEKDLQETFRVVDTTLF
RAFMYSRPTLASSLFRIPNFCDPQVVNERLVEHNRFNELVDFFYGKKLHRQALDLLRKFG
SPDEPDEAAPTLHGPQRTVLYLQGLPPEMIDVILEFSEWTLRKDPKLGMEVFLADSENAE
TLPRARVLHFLGGIDTALEIQYLEHIISELNDMTPEFHNRLVELFIRQLREEKKQGKEEE
WDSLMERLVQFLKDSRQYSLGRAFSLIPRDDPRFYEARAVVLSNMGQHKQALEIYVFQMK
DYKKAEEYCNRIHKSSEHPQPTSPSHPPGTTTITSPSSTEDPSQDEAHPSIYHTLLSLYL
TPPSPHKPNLPPALDLLSKHGSRLPATSTLSLIPDDLPVSELESYFRGRMRNANSIVNET
LVVAGLRKTGLVTSQALLLLGDGLPKGAVLPGGGSRVGGRNRRVVIGEERVCGVCHKRLG
GSVVAVLPGGEDAVVHYGCLGRSQQGKGMGIGELASPGQTGSVKSGVSGTQYGAWGRG
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atgctctccgcatttacggctcgacccatcatcgagctcaagcagagagacaagtccaag
atcgagtccatcctcgcctacggtgaccgtgttctcgtcggcttgaatacgggatccctc
agaatataccgtgtaaacgaacttccacccgctcctcctcctcctcctcctccaccacca
ccaagccagtctgccaacggaacgtcgtcccaacaactgagcgaagctacaaccgagtcg
acgacccaagaccccaatggacctttgacgacgacccaagagtaccaggctgctgcgcca
ggcttttacaatgcccaagccgcgccgagaggccccaagcccaccgacctcctccgcgag
gtagaaaagttctcgacgcgcgctatcgaacaactcgccatcatcaaggaagccaacacc
ataatctcgctgtccaactacaacggcgttgccctccacgacctccagaccttcgagcct
atcgagttccccacagcccggacgaagagcgcttccaccttcgctgtcacgagcaacatt
gtcaaggaccccgacactgggatacccgagattatatcgcgtctagctgttgctgtaaag
cgccgcttgcttctgtggtcatggcacgaaagtgagctctcccccgatgtcaccgagata
gtcctgtctgaggccatccggtctctgacgtgggccaacgcaaacaaggtggtctgcggc
atgaacggtggctaccaaatagtcgatatcacaaccggtcagatggaggatattgttggt
cctggggctataggggcagcaggagggcaaagtcgctttggcgccacagccagtatggga
tatatgggattgggcaactttacgcccaaaccgctgtcggcgaagctcgccgagggtcag
ttattgctcgccaaagacatcaatacgttattcatcaatgacgccggaaaagccttggag
aagcgccagattccttggcaagctgctcctgagagcataggatatagctacccctatatt
cttgccttacaatcaccgaccaagggcagtctcgaagtacgaaatccggacacactgaac
ctgctccagaccatcagtctccctggtgccgcttctctgcatttcccgccacccacggtc
agcctggcacatgctggaaagggctttcacgtcttgagcgagagagtggtgtggaaaatg
gatgctaccgactatgattcccagatcgacgagctggtaaaaacccagaggtacgatgaa
gccattagcatcttggctatgttggaggacgctcttctcaagaacaagactgagaccatg
cgcgaagtcaaaatgctcaaggccgaactgctcttccgccaaaggaagtttcgcgagtct
atggacttgtttaatgaagacgaggtccatgctccgcctgagagagtattaaggctcttt
cccaagatcattgtgggagagctgggcgttgatgagaagaagcctgaagagccgcaggaa
gagtcggaccacgaagcgccccctaacggtaaagcaaatggagatcatgcacccaaggag
gatgagccgcattctgaggtatcgtcgccgcagaaaggaggcgggtttgccaagtacctc
atgggtcacggtcgcaagaagtttgatcccgaaacctcatccatagtctcttccagaaga
gccccagtcgatgatgatgcggccagcatcaagggcaagacggccgaggaacaacgcgcc
caagacgaaaaggatctcatgacagccgtctcggagctgaacagctacctggccggagcc
agagcgagacttcagagagtcattgatccagtcaccggaaagttgaagccgcgcaagtca
gcaaacggggtcacagaggaggcgttcaatacactcctaatgtttcacaaggatgaggat
gatgaacagcttgagaaggatctgcaggagactttcagagtcgtcgacaccactctgttc
cgcgccttcatgtactcccgtcccacattggccagctcccttttccgaatccccaacttt
tgcgacccacaggttgttaacgagaggcttgtagagcacaaccggttcaacgagctagtt
gacttcttctacggcaagaagctgcatcgccaggctctagatctgcttcgcaagtttggc
tcgccggacgagcctgatgaggcggcgcctacgttgcacggtccccaaaggacggtcctg
tatcttcaaggcctcccgcccgagatgatcgacgtcattctcgaattctcagagtggact
ttgaggaaagaccccaagctgggaatggaggttttcctcgccgactcggagaatgccgag
actctcccaagagcccgggtcctccacttcttgggcggcatcgacacagccttggaaatc
caatacctggagcatatcatctcggagctgaacgacatgactcccgagtttcataaccgc
cttgtcgagttgtttatcagacagctcagggaggagaaaaaacaagggaaggaggaagag
tgggactctctcatggagcggttggtacagttcttgaaggacagtcggcagtacagcctc
ggaagagcgttcagtctcattccccgagacgacccacgcttttatgaagcgcgagctgtt
gtccttagcaacatgggtcaacacaaacaagcactcgaaatttacgtcttccagatgaaa
gactacaaaaaagcagaagaatactgcaaccgcatccacaaatcctccgaacaccctcaa
cccacctccccctcccaccccccgggtaccaccaccattacctcgccctcctccaccgaa
gacccttctcaagacgaagcccacccgtccatctaccataccctgctctccctctacctg
acccctccctcccctcacaaacccaacctgccacccgccctcgacctcctctcgaagcac
ggctctcgcctgcccgccacctccaccctctctttgatccctgacgacctgcccgtttcc
gagctcgagtcctacttccgcggccgcatgcgcaacgcgaacagtattgttaacgagacc
ctcgtcgttgcgggcctgaggaagaccgggttagttaccagccaagctcttctcttgttg
ggggatggattaccgaagggagcggttctgccgggtggtggaagcagagtgggaggaaga
aatagacgggtggtgattggggaggagagagtttgtggggtatgtcataaacggttaggt
gggagcgtcgtggcggtgttgccgggaggggaagatgcggttgttcattatgggtgtttg
gggaggagtcagcaggggaagggtatggggattggtgaattggcgagccccgggcagacg
gggagtgtgaagagtggtgtgagtgggacgcaatatggcgcttgggggagggggtag
DBGET
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