Neurospora crassa: NCU01612
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Entry
NCU01612 CDS
T01034
Name
(RefSeq) pre-mRNA splicing factor ATP-dependent RNA helicase PRP43
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
ncr
Neurospora crassa
Pathway
ncr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ncr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NCU01612
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ncr03041
]
NCU01612
03009 Ribosome biogenesis [BR:
ncr03009
]
NCU01612
Enzymes [BR:
ncr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
NCU01612
Spliceosome [BR:
ncr03041
]
Complex A
U2 snRNP components
U2 related factors
NCU01612
Complex B
NCU01612
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
NCU01612
Ribosome biogenesis [BR:
ncr03009
]
Eukaryotic type
90S particles
Helicases
NCU01612
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
AAA_22
HA2_N
SRP54
AAA_19
T2SSE
AAA_23
AAA_30
AAA
NB-ARC
nSTAND3
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
3872671
NCBI-ProteinID:
XP_956523
UniProt:
Q1K557
LinkDB
All DBs
Position
II:2958192..2961293
Genome browser
AA seq
774 aa
AA seq
DB search
MASHDDKGVKRSNMDGNDQDSKRIKRAENGDAAPEKYNPYLAHLNEDGNGNGTNGDFESP
LDAFERHKTTAAQAAQAEDSELNPWTGQPHSQRYFDILKVRRDLPVHKQRQEFLDMYHNT
QILVFVGETGSGKTTQIPQYVLYDELPHTNGKLIACTQPRRVAAMSVAQRVANELDVELG
QEVGYSIRFENRTGPKTMLKYMTDGQLLRESMHDHDMSRYSCIILDEAHERTLATDILMA
LLKQIAARRSDLKIIVMSATLDAQKFQSYFYNAPLLAVPGRTHPVEIFYTPEPERDYLEA
AVRTVLQIHATEPEGDILLFLTGEEEIEDACRRISLEVDDMIRESDAGPMKVYPLYGTLP
PAHQQRIFEKAPEPLRKGGRPGRKVIVSTNIAETSLTIDGIVYVVDPGFSKQKIYNPRSR
VESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEKAFKKELIEQTYPEILRSNLANTVL
ELKKLGVEDLVHFDLMDPPAPETMMRALEELNYLACLDDDGELTRLGGLASEFPLDPALA
VMLISSPEFYCSNEILSIVSLLSVPSIWVRPNNARKRADEMKMQFAHPDGDHLTLLNAYH
AFKGAETNGDDMKRWCHEHFLSYRHLSSADNVRAQLKRIMETHDISLVSTPFQDKNYYTN
IRRALLAGFFMQVAMRESSNSKVYKTVKDDQLVMIHPSTSVTSPYDWVVYNEFVLTTKQY
VRTVTNIRPEWLLEIAPVYYDLDTFEKGEIKSALTRITDKVKRRQAIKGSGSAR
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggccagccacgacgacaaaggcgtcaagagatccaacatggacggcaacgaccaggac
tcaaagcgcatcaagcgtgccgagaatggcgatgctgcccccgaaaagtacaacccctac
ctcgcccatctcaacgaggacggcaacggcaacggcaccaatggcgacttcgaatcgccc
ctcgacgccttcgagaggcacaagaccaccgccgcccaggccgcccaggccgaggactcg
gagctcaacccgtggaccggccagccgcactcgcagagatacttcgacatcctcaaagtg
aggcgcgacctccccgtccacaagcagcgccaggagttcctcgacatgtaccacaacacc
cagatcctcgtcttcgtcggtgagacgggttccggaaagaccacccagatcccccaatac
gtcctctacgacgagctcccccacacgaacggcaagctcatcgcctgtacccagccccga
agggtggcggccatgtcggttgcccagcgtgtcgcgaacgagttggatgtcgaactgggc
caggaagtcggttacagcattcgtttcgagaaccggaccggccccaagaccatgctcaag
tacatgacggatggtcagctcctgcgcgagtccatgcacgaccacgacatgtcccgctac
agctgcatcattctcgatgaagcccacgaacgtaccctcgcgaccgatatcctcatggcc
ctgctcaagcagatcgccgcccgcaggtcagacctcaagatcattgtcatgtctgccacg
ctcgatgcccaaaagttccagtcctacttctacaacgccccattgctcgccgtccccggt
cgtacccatcccgtcgagatcttctatacccccgagcccgagcgtgactacctcgaggcc
gccgtacggaccgtcctccagatccacgccactgaacccgagggagacatcttgctgttc
cttactggtgaggaggagattgaggatgcttgccgaagaatcagcttggaggtggacgac
atgattcgcgagtcggatgctggccccatgaaggtttaccctctttacggcactctccct
cctgcgcaccaacagcgcattttcgaaaaggcccccgagcccctgcgcaagggtggcagg
cctggtcgcaaggtcattgtctcgaccaatattgccgagacgtccttgacaatcgatggt
atcgtctacgtcgtcgaccccggtttcagcaagcaaaagatttacaacccccgctctcgt
gttgagtctttgttggtttctcctatctcgaaggcctctgctcagcaaagagctggtcgt
gctggtcgtacacggcccggtaaatgcttccgtctttacaccgagaaggctttcaagaag
gaacttattgagcaaacctatcctgaaattctccgatccaacctggccaacactgttctg
gagttgaagaagcttggtgttgaggatttggtacactttgatctcatggaccctcctgcg
cccgagaccatgatgcgcgccctggaggagcttaactacctcgcctgcttagatgacgat
ggtgagcttacgcgtctcggtggtttggcttccgagttcccgcttgaccccgccctcgcc
gtcatgcttatttcgtcgcccgagttctactgctccaacgagatcctttccattgtgtcc
ctcctctccgtcccttcgatatgggtacgccccaacaacgcgcgtaagcgggccgacgag
atgaagatgcagttcgcccaccccgacggcgaccacctgacgctgctgaacgcctaccac
gccttcaagggtgccgagaccaatggcgacgacatgaagcgctggtgccacgagcacttc
ctctcataccgtcacctgtcgagcgccgataacgtccgggctcagctcaagcgtattatg
gagacgcacgacattagcctggtcagcacgccgttccaggacaagaactactacaccaac
atccgccgcgcgctcctggctggcttcttcatgcaggtggccatgcgcgagagcagcaac
agcaaggtgtacaagacggtcaaggacgaccagctcgtcatgatccacccgagtacgtcg
gtgacgagcccatacgactgggtcgtctataacgagttcgttctcacaaccaagcagtac
gtcaggacagtgaccaacattcgtcctgagtggcttcttgaaattgcccccgtctactac
gacctcgatacctttgagaagggcgagataaagtcggcgctcactcgtatcaccgacaag
gtcaagcggaggcaagccatcaagggcagcggcagcgcgcgttag
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