Neurospora crassa: NCU01638
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Entry
NCU01638 CDS
T01034
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
ncr
Neurospora crassa
Pathway
ncr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ncr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NCU01638
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncr03021
]
NCU01638
Enzymes [BR:
ncr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NCU01638
Transcription machinery [BR:
ncr03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
NCU01638
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
3872153
NCBI-ProteinID:
XP_956006
UniProt:
F5HFM2
LinkDB
All DBs
Position
II:complement(2864458..2870350)
Genome browser
AA seq
1701 aa
AA seq
DB search
MNISQPVSSSLDSVEFTFLTDTEIRAVSVRKIENESTFDSLLNPVPGGLYDPALGSWGDS
LCTTCNLGQSQCPGHPGHIELPVPVYHPVFMDQAYRLLRAQCVYCHRFRLPRREIHRYSC
MLRLLQCGLLKEAQMIDSFGESEFGSAIRQFQLADVPEMEDDEAEEEGNNLNDSTIRQRE
AYVRAVLRDYRTKVTMRDINKGKHEGAADMRRALVKEFLAAIIKDKKCRTCDGISPVYRK
DRYTKIFERDLTQKEKAAMAQAGRKRADALAMKGGKKKNHDDDEGIADIESTASESDNSE
GEGEELDENGDVVMADAGSKTKAKEKAEKRALPQRYISSLEVKERLNFLFQKEQEIVSLL
FSSKPRPKHAKPMTADMFFIQTLLVPPNKFRPEARMGDQVTEAQQNSLYKLILRGSSMVA
QISREVSETAKGNAPEDGRRARDINALYQAWTQLQDAVNSLIDRDKNPVQGAAGKRNEDG
IKQKLEKKEGLFRKNMMGKRVNFAARSVISPDPNIETSEIGVPPVFARKLTYPEPVTSHN
YHDLKNAVQNGMEKWPGASAIEMENGQIINLRNKSSEERQALANQLLAPTNNNFSGVRNK
KVHRHLTNGDVVLMNRQPTLHKPSIMGHRVRVLPGEKTIRMHYANCNTYNADFDGDEMNM
HFPQNEIARAEALQLADTDHQYISGTAGKPLRGLIQDHLSVSVILCNKDTFFDRANYHQL
IYAALRPESGHIMGDKIELLPPAIIKPVPRWTGKQVITTILKNIKPPNCGDLWMNGSTQV
KAHQWGDHAPEEGQVTFRDGEFITGILDKSQLGPSSGGLIHSIHEVYGPSAAGKLLSCMG
RLLTRYLAMVAFSCGMDDLVMTPKGEADRKEKIKAAAHIGLEVAAKYVSLEEQKPTPEDP
LLLQRLEEVMRNDKKQENLDLLMNQRCAQLSSEITKTCLPAGLQKKFPKNQMQSMTTSGA
KGSPVNANLISCNLGQQVLEGRRVPVMVSGKTLPSFKPFDTNARAGGYIVQRFLTGIRPQ
EYYFHHMAGREGLIDTAVKTSRSGYLQRCLIKGMEGLKVAYDTSVRDSDGSIIQFLFGED
GIDISKQKYLNDFEFVLRNLKSELAHLHYSEEGTQALFEHKDEMIKRMKAAIKSRDTRNP
LNPIESDVDPALYAFATSENFFEKMTKYVKENKDGLIKEKKGDSSGIIVRKNAEKILAAK
YIRSLVEPGEAVGIVAGQSVGEPSTQMTLNTFHLAGHSAKNVTLGIPRLREILMTASSKI
STPAMTLYPNAELSDTDCERFAKSISILPLADVTKEVTVREKMGRGLGYPLAKLFEIRLR
FFPSEEYCKTYAIEIADVLATVERKFVPLLGQLTKKEIKKKYKENSAATPEIGVKVGTVE
MAAPDGERAVGEDGDADDDDDGDDDATNAKSRANRHEAVSYGPNDDDDDAIQKSLQRADD
GEEEGEERLEFDDEGYGGSPEPEDRNADGDMSVYKSRSRETRIKDKNDFVARFHCDEQGG
EWCEMILEFDPATPKILMLNLVTEAVKKALIQQIPRLGTATFVVENKERLVHTEGSNIKA
MQQYADYINPNKIMTNDIAQVLEIYGVEAARNSIVRELSGVFKGHGIGVDPRHLNLIGDY
MTRNGGFTPFNRMGLTGNVSPFTKMSYETTVGFLKDAVLDGDWDSLDTPSGRLVVGKLGV
TGTGSFDVFTKVPTEHHSHVL
NT seq
5106 nt
NT seq
+upstream
nt +downstream
nt
atgaatatttcgcagcccgtgtcgtcctctctggacagcgtcgagttcaccttcctgacc
gacaccgagatccgcgccgtctcggtccgcaagatcgagaatgagagcaccttcgacagc
ctgctgaaccccgtccccggcggtctctacgaccctgccttgggttcctggggcgactca
ctctgcacaacatgtaaccttggccagtcgcaatgtcccggtcatcccggccacatcgag
ctccccgtgcccgtctatcaccccgtcttcatggaccaggcataccgtctgctgcgcgcg
caatgtgtttactgccaccggttccgccttcccaggagggaaatccaccgctactcctgc
atgctccgtctgctgcagtgtggccttctcaaggaggcccagatgatcgactctttcggc
gaaagcgagttcggctccgccatccgccaattccagctggccgacgtgcccgagatggag
gatgacgaggctgaggaggagggaaacaacttgaacgacagcaccatccgccaacgggaa
gcatatgtccgcgctgtccttcgcgattataggactaaggtgactatgcgcgacatcaac
aagggcaagcacgaaggcgccgccgatatgcgcagggctcttgtcaaggagttcctggct
gccatcatcaaggacaagaagtgcaggacttgcgacggcatctctcccgtctaccgcaag
gatcggtacaccaagattttcgagcgcgacctcacacaaaaggagaaggccgccatggcc
caggctggaaggaagcgtgctgacgcgctggccatgaagggcggcaagaagaagaatcat
gatgatgatgaggggatcgccgatattgagtcgacagccagcgaatccgacaacagtgaa
ggagagggagaagagctcgacgagaacggcgatgttgtcatggcggacgcgggcagcaag
accaaggcgaaggagaaggccgagaagagggcccttccccagagatacatcagctctctc
gaggtcaaggagaggttgaacttcctcttccagaaggagcaagagattgtctctttgctc
tttagctccaagcctcgtcccaagcacgcgaagccgatgaccgccgacatgttcttcatc
cagacacttctcgtccctcccaacaaattcagacccgaggctagaatgggcgaccaagta
acggaagcgcagcaaaacagtctctacaagctaatcctcagggggtcgtctatggtcgcc
cagatctctcgcgaggtttccgaaaccgccaagggtaatgcccccgaggacggacgcagg
gccagggatatcaatgcgctctaccaggcgtggacacagcttcaagacgccgtcaactcc
ttgatcgatcgcgataagaaccccgtccagggtgctgctggaaagcgcaacgaggacggt
atcaagcagaagctcgagaagaaggagggtcttttccgcaagaacatgatgggtaagcgt
gtcaactttgccgccagatccgtcatctctcccgatcccaacatcgagaccagcgagatc
ggtgtccctcctgtgttcgccaggaagctcacataccccgagcccgtaacgagccacaac
taccatgatctcaagaatgcagtgcagaacggtatggagaagtggcccggtgcttccgcc
attgagatggagaacggccaaatcatcaacttgaggaacaagtcttcggaggagcgtcag
gcccttgccaaccagctcttggccccgaccaacaacaacttcagcggagttcgtaacaag
aaggtccaccgccatcttaccaacggtgatgtcgtcctcatgaaccgtcagcccaccctc
cataagccctccatcatgggtcacagagtcagagtgctgccgggcgagaagacgattcgc
atgcactacgccaactgcaatacctacaacgccgatttcgatggtgatgagatgaacatg
catttcccccaaaacgagattgcccgtgccgaggcccttcagctcgccgacactgatcac
caatacatctccggcaccgctggcaagcctctccgcggtctcattcaggatcatttgtcc
gtttccgttattctgtgtaacaaggacaccttcttcgatcgggccaactaccatcaactc
atctacgccgctcttcggcccgaaagtggtcacattatgggagacaagattgagcttttg
ccgccggcgatcatcaagccggttccccgctggacgggtaagcaagtcattaccacaatc
ctcaagaacatcaagcccccaaattgcggtgatttgtggatgaacggctctacacaagtc
aaggctcatcagtggggtgaccatgccccagaagaaggccaggtcactttccgtgatgga
gagttcatcaccggtatcctcgacaagtctcagctgggtcccagcagtggtggtttgatt
cactcgattcacgaagtttacggcccttcagctgctggtaagctcctcagttgcatgggt
cgtctcctcactcgttacctggccatggttgccttttcgtgcggtatggacgatctagtc
atgacgcccaagggagaggcagacagaaaggagaagatcaaggccgccgctcacatcggt
ctcgaggtcgccgccaagtatgtgtcgctcgaggagcagaagcctactcccgaagatccc
cttctcttgcaacgcttggaggaagttatgcgcaacgacaagaagcaagagaacttggat
ctcttgatgaaccaacgctgcgcccaactttctagcgagatcaccaagacatgtcttcct
gctggtctgcaaaagaagttccccaagaaccaaatgcaaagtatgacaacatcaggtgct
aagggttctcctgtcaacgccaacctcatctcttgtaacttgggtcagcaggttttggaa
ggtagacgtgtccccgtcatggtcagcggcaagactctccctagtttcaagcccttcgat
accaacgccagagctggtggttacatcgtccagcgtttcttgactggtattcgcccccag
gagtactacttccatcacatggccggccgtgagggtcttatcgacacagccgtcaagaca
tcgcgttccggttaccttcagagatgtttgatcaagggcatggaaggtctcaaggtcgct
tacgacacctcggtcagagactcggatggctccatcattcagttcctctttggtgaggat
ggtatcgatatctccaagcaaaaatacttgaacgacttcgagttcgtcctccgcaacctg
aaatccgagttggcgcatctccactactcggaagagggtactcaggccctcttcgagcac
aaggacgagatgatcaagcggatgaaggctgccatcaagtcgagggatacccgcaacccg
ctcaacccgatcgagtcggatgttgaccctgccttgtatgctttcgctacttcggagaac
ttcttcgagaagatgaccaagtacgtcaaggagaataaggatggcttaatcaaggagaag
aagggcgactcctctggcatcattgttcgcaagaatgccgagaagattttggcggccaag
tacatcaggtcattggtggagcctggtgaggctgttggtatcgtggccggtcagtccgtc
ggtgagccctcgacacagatgacactgaacactttccatttggctggtcactctgccaag
aacgtcacactgggtatcccccgtctgcgtgaaattctcatgacagcttcttccaagatc
tcgactcctgccatgaccctctaccccaacgctgagctctctgatacagactgcgagcgg
tttgccaagtccatcagcattcttcccctggccgatgtcaccaaggaagttaccgtcagg
gagaagatgggccgtggcttgggctaccctcttgccaagctcttcgagatcaggttgcgc
ttcttcccatctgaggagtactgcaagacatacgcgattgagattgcggatgttcttgcg
actgttgagaggaagttcgtgcccctgcttggtcagctcaccaagaaggaaatcaagaag
aagtacaaggagaactctgctgccactcccgagatcggtgtcaaggttggcactgtggag
atggcggcgcccgacggcgagcgtgctgtcggcgaggacggcgacgcggacgacgatgac
gacggtgatgatgacgccaccaacgccaagagcagagccaatagacacgaggcagtgtcc
tacggccccaacgacgacgatgatgatgccatccagaagtctctacagcgcgcggatgac
ggtgaggaggagggcgaggagagacttgagttcgacgatgaaggctacggcggtagccct
gagcccgaggaccgcaacgccgatggcgatatgtccgtgtacaagtctcgatcacgcgag
acccgtatcaaggataagaacgacttcgttgcccgcttccactgcgatgagcaaggcggc
gagtggtgcgagatgatcctcgagtttgatcccgcgacacccaagattctcatgctcaac
ctcgtcaccgaggctgtcaagaaggcgctcatccagcaaattcccagactcggcaccgcg
acattcgttgtggagaacaaggagcgtcttgtccacaccgaaggctccaacatcaaggcc
atgcagcagtatgccgactacatcaaccccaacaagatcatgaccaacgatattgcccaa
gtgctcgagatctatggtgttgaggccgccaggaacagcatcgttcgcgaattgagcggt
gtcttcaagggtcacggtatcggtgtcgacccccgccatctgaacctcattggcgactac
atgaccagaaacggtggcttcactcctttcaaccgtatgggtttgaccggcaacgtcagc
cccttcaccaagatgagttacgaaactaccgtcggcttcctcaaggacgccgttctcgac
ggcgattgggacagccttgacaccccatcaggcagactggttgtcggtaagctgggtgtt
accggtaccggctcgttcgacgttttcaccaaggtgcctactgagcaccactctcatgtg
ctataa
DBGET
integrated database retrieval system
