Neurospora crassa: NCU01793
Help
Entry
NCU01793 CDS
T01034
Name
(RefSeq) RNA binding domain-containing protein
KO
K12881
THO complex subunit 4
Organism
ncr
Neurospora crassa
Pathway
ncr03013
Nucleocytoplasmic transport
ncr03015
mRNA surveillance pathway
ncr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ncr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NCU01793
09122 Translation
03013 Nucleocytoplasmic transport
NCU01793
03015 mRNA surveillance pathway
NCU01793
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncr03019
]
NCU01793
03041 Spliceosome [BR:
ncr03041
]
NCU01793
Messenger RNA biogenesis [BR:
ncr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
NCU01793
TREX complex
NCU01793
Spliceosome [BR:
ncr03041
]
Complex C
Other components
EJC/TREX
NCU01793
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
NCU01793
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_PARP14_3
RRM_occluded
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
3872620
NCBI-ProteinID:
XP_956471
UniProt:
Q1K554
LinkDB
All DBs
Position
II:2394043..2397574
Genome browser
AA seq
249 aa
AA seq
DB search
MSGKLDQSLDEILSTQRRGKSNARGRGGRRSAGGKPTNAAPAGGIQKNTKPARNAAKPAP
AKSAGLTGESKIVVSNLPKDVSEGQIKEYFQQAIGQVKRVELSYGPGGTSRGIAHITFHH
ADGATKAYNTLNGLLIDNRPVKVEVVVSNAELIPQPKSLTQRITQPKAQPKSAATVKHAA
NAPKGAAAAKPGSKKGPRRPRSARPAKKTVEELDSEMADYFESGTTDNATGAAPAAANGG
DAPMEDEIL
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgtccggaaagctcgaccagtctctcgacgagattctctccactcagcgccgcggtaag
tccaacgcccgcggccgtggaggtcgccgctcggctggcggtaagcccaccaatgctgcc
cccgctggcggtatccaaaagaacacaaagcccgctcgcaacgctgccaagccggcgccc
gcaaagagtgctggtcttaccggcgagagcaagattgtcgtgagcaacctgcccaaggac
gtttccgaaggccagatcaaggaatacttccagcaagctattggacaggtcaagagggtg
gaactttcgtatgggcccggaggcactagccgcggtattgctcatattaccttccaccac
gccgatggtgctaccaaggcgtacaacactctcaacggtctcctgattgacaaccgcccg
gtcaaggtcgaggtcgttgtttccaatgccgagttgatccctcagcccaagagcctgact
cagcgtatcacacagcccaaggcccagcccaagtctgccgccactgtcaagcatgccgcc
aacgcccccaagggtgctgctgctgctaagcctggcagcaagaagggtccccgtcgccct
cgcagcgcccgccctgccaagaagaccgtcgaggagttggattctgagatggctgactac
ttcgagagtggcaccacggacaacgccaccggagccgcgccggccgctgccaacggtggt
gatgctcccatggaggacgagattctttga
DBGET
integrated database retrieval system
