Neurospora crassa: NCU01930
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Entry
NCU01930 CDS
T01034
Name
(RefSeq) U6 snRNP-associated protein Lsm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
ncr
Neurospora crassa
Pathway
ncr03018
RNA degradation
ncr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ncr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NCU01930
09123 Folding, sorting and degradation
03018 RNA degradation
NCU01930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncr03019
]
NCU01930
03041 Spliceosome [BR:
ncr03041
]
NCU01930
Messenger RNA biogenesis [BR:
ncr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
NCU01930
mRNA degradation factors
5'-3' decay
Lsm complex
NCU01930
Spliceosome [BR:
ncr03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
NCU01930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
3880263
NCBI-ProteinID:
XP_964114
UniProt:
Q7SDP3
LinkDB
All DBs
Position
I:1982935..1984521
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AA seq
143 aa
AA seq
DB search
MADRGNRGGRGGGYRGGRGGNRGGAGGSGSGAGGGQGGGGAQGGDRGERPKKENILDLKK
YMDQRITVKFNGGREVTGTLKGYDALMNLVLDDVQEAVRDEEGNETTRPLGLVVARGTLL
VVISPVDGSEVIANPFAQQEEEA
NT seq
432 nt
NT seq
+upstream
nt +downstream
nt
atggccgatagaggaaataggggaggccgtggtggcggctaccggggcggtcgcggaggt
aaccgtggaggagcaggtggttctggctccggcgccggtggaggtcagggaggcggtggt
gctcagggcggtgaccgcggtgagcgccctaagaaggaaaacatcctcgacctcaagaag
tatatggaccagcgcatcactgtcaagttcaacggtggacgtgaagttaccggtacgctc
aagggatatgatgcgcttatgaacttggttttggatgatgtgcaggaagctgtgagagac
gaagaaggcaacgaaaccacccgtcctctaggacttgttgttgcgcgcggtacgctcctc
gttgtgatcagccccgtcgacggaagcgaggtgattgcgaaccccttcgctcagcaggag
gaagaagcttga
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