Neurospora crassa: NCU01939
Help
Entry
NCU01939 CDS
T01034
Name
(RefSeq) nonsense-mediated mRNA decay protein
KO
K20223
importin-7
Organism
ncr
Neurospora crassa
Pathway
ncr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ncr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
NCU01939
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ncr03009
]
NCU01939
Ribosome biogenesis [BR:
ncr03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
NCU01939
Pre-60S particles
NCU01939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBN_N
Cse1
Xpo1
TPR_IPO11
MOR2-PAG1_C
TPR_Trm732_C
TPR_IPO5
Motif
Other DBs
NCBI-GeneID:
3880272
NCBI-ProteinID:
XP_964123
UniProt:
Q7SDN4
LinkDB
All DBs
Position
I:complement(1939316..1944145)
Genome browser
AA seq
1047 aa
AA seq
DB search
MDANAIRSCIVATLDADADVRRRAELQLKQAEQQVGFTDVLLDLLQTEQDVNLKLSTVIY
LKNRVNRAWQRSDDYPQEAVLDEDAKARFRDRLLPILASSETLVRHQLVPILQRVLHHDF
PEKWPTFMDYTVQLLNTNNAPSVLAGLQCLLAICRSFRYKMSDTDHRAQFEKIVEVSFPR
LLAVCDELVNQDSEEAGEMLHIALKAYKHTAWLELPACLREQSVNLGWCTIFLRTVSKPI
PVSAMQDDPLGRERHHWWKAKKWAYFNLNRLYIRYGNPHNIMEKGADGQLLQFAKNFIAQ
VAPEILKHYLAEIEKWVAKTVWLSRPCLSYTLVFLDECIRPKEMWTHLKPHLTNLVTHFI
FPVLCLSEEDVENFEEEPEEYLHRKLNFFEEVSAPDVAAVNFLVSLTKARRKQTFEILKF
VNEVVNQYEQAPEDQKNHLAKEGALRMIGTLAPVILGKKSPIADQVEYFLVRYVFPDFTN
PQGFLRARACDTIEKFEQLDFKDQQNLLTVYRHILDCMADPKLPVRVTAALALQPMIRHE
IIRTSMQQNIPTVMQQLLKLANEADIDALANVMEDFVEVFATELTPFAVALSEQLRDTYL
RIVRELLENNERRDGAEDEFGDYLDDKSITALGVLQTIGTLILTLESTPEVLLHIESVLM
PVIQITLENKLYDLYNEVFEIIDSCTFAAKQISPNMWQAFELIHTTFKSGAELYLEDMLP
ALDNFVQYGAPQLVQKPEYIQALFEMVQDMFNDTKVGGCDRICACKLSEAMMLSLRGHID
QCVQGFIGLAMNVLTSQDVKVKSYKIHLMEMVINAVYYNPLLTLQILESQGWTNKFFSLW
FSSMDSFSRVHDKKLCIVAIVALISIPADQIPPTVAVGWPRLLQGITSLFGSLPTALKNR
EEALKDDYHLDGGVYDENEEWDDDENNWDAGEEGEEEDLGDVKGESEAYLEFLNEEAQKF
SGTDLEYSDDELGEDGVLLESPLDKLDPYSIFKTSLLKLQAEQPQYYAGLVQHLSMEEQS
VISAVLQQADTQEAAAQQAAAAANGTS
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgaacgccattcgaagttgcatcgtcgcgaccctcgacgccgatgccgacgtt
cgtcggagggctgaactccagctcaagcaggccgagcaacaagtcggtttcaccgatgtc
ctcttggacctcctccagacagagcaggatgtgaacctgaaactttcaaccgttatctac
ctcaagaaccgagtcaaccgcgcctggcagcgctccgacgactacccgcaagaggcggtt
ttggacgaagacgccaaggcacgcttccgtgaccggttactgcccattctcgccagctcc
gagactctggtccgccaccagctggtccctattttacagcgcgtcttgcaccacgacttt
cccgaaaaatggccgaccttcatggattacacagttcagttgctcaacaccaacaacgcc
ccctctgtcctggctggccttcaatgtttgctcgctatctgccgttcgttccgctataag
atgagcgataccgatcaccgtgcgcaattcgaaaagattgtcgaagtcagcttcccgaga
ctgttggccgtctgcgatgagttggtaaaccaggatagtgaggaggctggcgagatgtta
cacattgctctcaaggcgtacaagcatactgcctggcttgaactccccgcctgcctccgc
gagcagtccgtcaatctcggatggtgcaccatcttccttcgtaccgtatcgaagccaatt
cctgtgagcgctatgcaggacgacccgttgggacgtgaacgccatcattggtggaaggca
aagaagtgggcatacttcaacctaaacaggctatatattagatacggtaaccctcacaac
atcatggaaaagggagccgatggtcagttgctccaattcgccaagaactttatcgcccaa
gtcgctcccgaaatcctcaagcactaccttgccgagatcgagaagtgggtagccaagacc
gtctggctgagccggccgtgcttgtcgtacactcttgtcttcctggacgagtgcattcgt
cccaaggagatgtggacacatttgaagcctcaccttactaatttggtcactcatttcatc
ttccctgttctctgcctttcggaagaggacgtggaaaacttcgaggaggaaccggaggaa
taccttcaccgcaaacttaacttttttgaggaagtctccgcgcccgacgttgccgctgtc
aactttttggtgagcctcacgaaggcccgtagaaagcagaccttcgagatcctcaagttc
gtcaatgaagtcgtcaatcaatacgagcaggcgccagaggaccagaagaaccacctggcg
aaggagggtgcgctacgcatgatcggaactcttgctccggttatcctgggcaagaagtcc
cctatcgctgatcaggtggaatacttcttggttcggtacgttttcccggatttcacgaac
ccgcaaggcttcctcagagcccgcgcgtgcgacaccattgaaaagtttgagcagctcgac
tttaaggaccagcagaacctccttactgtctaccgccacattctcgactgcatggccgac
cccaagttgcctgtccgtgtgactgctgctttggccctacagcctatgatcagacatgag
atcattcgcactagcatgcagcagaacatcccgacggttatgcagcagcttctcaagctt
gccaacgaagccgatattgacgccctcgccaacgtgatggaggacttcgtggaggttttc
gctactgagcttacaccgtttgccgtggctcttagcgagcagctgcgcgatacctacctg
cgcatcgtcagagagcttctcgaaaacaacgagagacgtgatggtgccgaggatgagttt
ggcgattacctcgacgacaagagtataactgcgcttggtgtgttgcaaacaatcggtact
ctcatcctcactcttgaaagtaccccagaggttcttcttcacattgagagcgtcctgatg
cctgtcatccagattaccttggagaacaagctttacgatctctacaacgaagtctttgaa
atcatcgacagctgcacttttgccgccaagcagatctctcccaacatgtggcaggccttt
gagcttatccatacgacattcaagtcgggcgccgagctgtatctggaggatatgcttcct
gcgttggacaactttgtgcagtacggcgcgccccagcttgtccagaagcctgaatacatt
caggcgctgtttgagatggttcaggacatgttcaacgacaccaaggttggcggctgcgat
agaatctgcgcgtgcaagctttctgaagccatgatgcttagtctgcgtggccatattgat
cagtgcgtacaaggcttcatcggcttggccatgaacgtgctcacttctcaggatgttaag
gttaagagctacaagatccacttgatggaaatggtcatcaacgccgtctactacaaccct
cttctaaccctgcagattctcgaatctcaaggctggacgaacaagtttttcagcctttgg
ttcagcagcatggactctttctctcgcgtgcatgacaagaagctttgcattgtagccatt
gtggccttgatcagcattcctgctgaccagatcccccctactgttgccgttggttggcca
aggcttctccagggcatcacctctctgttcggcagcctgccgacggctctcaaaaaccgt
gaggaagcgctcaaggacgactatcaccttgatggaggcgtctacgacgaaaatgaggaa
tgggacgacgatgaaaacaactgggatgccggtgaagagggcgaggaggaggatcttgga
gatgtcaagggcgagagtgaagcatacctggagtttctcaacgaggaggcgcagaagttc
tccggtaccgatctcgagtatagtgacgacgagctcggcgaagatggcgttcttctcgaa
tcccctctcgacaagcttgacccctactccatcttcaagacgtctctgttgaaacttcaa
gcagagcagccccagtactatgctggcctggtacaacatttgagcatggaggagcagagt
gttatttcggctgtcttgcagcaggcagacacacaagaggctgccgctcaacaggctgcc
gcggctgctaacggaaccagttaa
DBGET
integrated database retrieval system
