Neurospora crassa: NCU02036 Help Entry NCU02036          CDS       T01034                                  Name (RefSeq) tRNA-splicing endonuclease   KO K10706   ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3] Organism ncr  Neurospora crassa Brite KEGG Orthology (KO) [BR:ncr00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:ncr03021]     NCU02036 Enzymes [BR:ncr01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      NCU02036     5.6.2.5  RNA 5'-3' helicase      NCU02036 Transcription machinery [BR:ncr03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      NCU02036 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  SEN1_N AAA_11 AAA_12 SEN1_barrel AAA_19 UvrD-helicase AAA_30 Viral_helicase1 DEAD AAA_22 CUL7_CUL9_N Motif Other DBs NCBI-GeneID:  3880798 NCBI-ProteinID:  XP_964658 UniProt:  Q1K916 LinkDB All DBs Position I:complement(1600191..1607696) Genome browser AA seq 2130 aa AA seqDB search MSDKMEYPELGTADVQMAMMEMHQAFEEFPPDAHPICPLLSDDDDTDYALPDLPDANGTT VAEKQKRIADGFERRRITYGLSLLLVMPEAGKWINEWKERVNFFLTKCDQCARTWHRTRQ QFIRAIDQYTSRDNAELLRNLQKNLEAFDEERITRGLKRAKFILERDGPMPTTKLVRIEL WPCLALFESLCCMAYLNTNKANLEIFNYVFEHVQPKKPLKMVGGAIPTMTYFLFEEYPVH RAFAEAQWQRMLPESLTDEEWEWAVRSGLKSHILGHRGIQPPARLCRFWSGFLLILRAMS EKSILENLRGMEVQPNVYFLALENLGTNNVPALSMILKALRTLMERSSKAFWDAYDQVTP SMIVEEIFKSPAFRPFLNQSLEPDMMVEDQENNGQLIPALAEWVRAFIRSLPSARRSDVC ETLLRHLFETLRVDAGAAPEAKATCILAGLVTLRECLDGYLSLPSFDTGTSLIMVNQLLN RVIQYKEVIIDATRLKAADKYNVGLSQAAIAIIQSALALDAKATLMEWDAFVKEKPVQDA VNRDSGALWESFLELVWNGQTDLAKAMLRATMPLRSIERFIPKRKDQLKNEHAKFNRRFQ QQTAAIGKMLGRLSDFNPADLDSFCSDPQSNTIQPIVATLIHGEEAIREAGFELIKAITG EMTPSEAVNKMLEEYFSQFLEAFTGAVNHITNAKDSNNPWSHMQHLLKCCEFVLNSLSDP SVGQLRRKTLTPAEHAIVKGWWDCEWRAVGHSFGSMRLWHVKVDKKVMEDFCRDVMELAE KLLAQDGLMASALSSPQSISATNGDDGSEGMKLVLEPPRIHSLPLVDMLQLRDKYLIAGI IEITKKLIKRLQDNGMDLPPKTVAYLNNMLKKRKMTDGRTDYPIKTNLTNEQRIELLKAL GDDAAIEAQFVGGKPVKQEVKPVMKQAKLDFSKASLKDHIASLTPAFEKATERRKNALLE TMKAEAPAKAPPKIDSKAADKIKEARRLEREAKAKRDAEAIARAKALRAPPKLVQGEGSG LAGVAGVRGKDHAPVLKDEIMVGSSSEDEDESDDDELITLHAAGKKNMTEAERRAHRLLA EKMRGPVKKVKIERSAKDMRARLIPPMDVLHQAILEWDIFHEGNDPPNGYRCDHVSDTYQ DPVSYKQTFFPLLINEAWRSFVTAKDETTSKPFGIKVLSRMTVDKFMEVTASVPVAINKD RQLSEGDIVIISKGQNPLQEPEELHCLSRIWKTTYKKDNVEVVYRLNAKGNQILPALLPG SEFTVVKITNMTTIEREYAALESLQYYDLMDEVLRAEPSPMLSFGEENIKNTMKNWNLNP GQAKAILNAKENDGFTLIQGPPGTGKTKTIVAMVGCLLTGVLKNPTAGVAIGRPGLGAAK NNAPAKKLLVCAPSNAAVDELVLRLKNGVKTQNGTTHQIEVVRLGRSDAINSAVKDVTLD ELVKAKLEAQLNKDEGPTDREKLHQEAGEIKQKIAELRPQLEAARTIDDRQLVNKYQREF DELKRRQAHIGARIDADKASGNTFARETEIKRRQVQQEILDKAQVLCATLSGSGHEMFKN LNVEFETVIIDEAAQCVELSALIPLKYGCSKCILVGDPKQLPPTVLSQSAARYGYDQSLF VRMQKNHEKDVHLLDTQYRMHPEISSFPRAAFYEGLLQDGDDMAKSRLQPWHRSTLLGPY RFFDVRGSQERGPKNQSLVNEEELKVAMQLYRRFKADYGNVDLKGKIGIITPYKAQLYRL RSQFAQRFGDAITDEIEFNTTDAFQGRECEIIIFSCVRASPTGGIGFMTDIRRMNVGLTR ARSSLWILGDSRALMQGEFWAKLIEDSKRRDRYTTGNIMGMLSQAGPQLSAAAFEALAIT STGNTRESTPSGIKREVVEVKDEDSDVQMGDRSSFRGSSPPAAAVGGSSAMGSSRPPSGR NTPSHTGNGFGSSPAPQQPQPTQYREGLPVIQETTFTPRVKKRPYEGGGGDQPGKKQHID PIASRAPKGPRGYNPNTNNLPPRPPPQAPSDPSAMEVLGLAPPTRAPAARQQQQQQPQYD YQPQQPPQYQPRPQQGAPPPYPGHQQQRQPPAGPSRPGPPTGPSRLGGSGTGYQQQQQQQ PQQQQQQQQRPPPIVKKKAPVDPFIKRKKR NT seq 6393 nt NT seq  +upstreamnt  +downstreamnt atgtcagacaaaatggaatacccagagctggggaccgcggacgttcagatggctatgatg gagatgcatcaagcctttgaagagtttcctccagacgcacatccaatttgccctttgctc agcgacgatgacgatacggactacgcgttgccagacctccccgatgcgaacggaacaacg gtggcagaaaagcaaaagcgaatcgctgacgggttcgagagacgtagaattacctacggc ctttcgcttctgttggtgatgccagaggctggtaaatggatcaacgagtggaaagagcgt gtcaacttctttctcacaaaatgtgaccaatgtgccaggacatggcataggacacgccag caattcatcagagccattgatcaatacacttcccgagacaacgccgagctcttgcggaat ctacagaaaaacctcgaagccttcgatgaagagcgcatcacgcgcggcctcaagagagcc aaattcatccttgagagggacggtcccatgccgactacgaagctcgttagaatcgaactt tggccgtgtctcgccttgttcgaatcgctctgctgcatggcatacttgaacaccaacaaa gcaaacctagagatattcaattacgtattcgaacatgtccagcctaagaagccgctgaag atggtgggaggcgcaattccgaccatgacatacttccttttcgaagagtatccggtgcac agggcgtttgcagaggcacaatggcaacggatgctgccggaaagcctcaccgatgaggag tgggaatgggctgtcagaagcggcctcaagtcccatatactcggccatagggggatacag cccccggcgcggctgtgtcgcttttggagcggattcctcctcattttgcgagctatgagc gaaaagagtattttggaaaacctccgcggtatggaagtacaaccgaatgtctacttcctt gctctcgaaaacctcggcaccaataacgtccctgctttgagcatgatactgaaagcactt cgtacgctaatggagcgttcgtcaaaggctttctgggacgcctatgaccaagtcactccg agtatgattgtggaggaaatcttcaagagcccggcttttcggccctttttaaaccagtct cttgagccggacatgatggtcgaggaccaggaaaacaacggtcaactaataccagcgttg gcagaatgggtcagggcctttatccgttcccttccctcagcgcggcggtcagacgtttgc gagactcttcttcggcatctgttcgaaactctccgggtcgacgcaggcgcagccccagaa gcgaaggccacttgcatccttgctggtctggtgaccttgagagaatgcttggacggctac ctcagccttccatcctttgatacaggaacgtctcttattatggtcaaccagttactcaac agagtgattcagtacaaggaagtcatcattgacgcgaccaggctcaaggccgcggacaag tacaacgttggcctctcacaggctgctatagctatcatacagtctgccctggcattggac gcgaaggcgacgttgatggagtgggacgctttcgttaaggaaaagcctgttcaagatgcc gtaaacagggactctggcgcattgtgggagtcattcctcgagctcgtctggaacggacaa acagatctcgccaaggccatgttgagagctacgatgcctctcaggagtatcgaacggttt atccctaagcggaaagaccagctcaagaacgagcatgcaaaattcaacagacgctttcaa cagcaaacggcggcaattggcaaaatgttaggccgcctgtctgacttcaacccggctgat cttgacagtttctgctcggatccgcagagtaacaccatccagcccatcgtggcgactcta atacacggtgaggaagccattcgcgaagctggcttcgagttgatcaaagccatcacaggt gagatgacgccatctgaggccgtgaataagatgcttgaggagtacttcagccagttcctg gaggccttcactggcgccgtaaaccatatcaccaacgccaaagactccaataatccgtgg agtcacatgcaacacttgttgaaatgctgtgaattcgtgctcaatagcttaagtgatccg tctgtaggtcaactcagacgcaagaccctgacccctgcggaacatgctatcgtcaaggga tggtgggattgcgaatggagagccgtcggccactcgttcggatccatgagactctggcac gtgaaggtggacaagaaagtcatggaggacttttgtcgtgatgtgatggaacttgcagag aagctcctcgcccaagacggtctcatggcttcggcacttagcagtcctcaaagcatctcg gcgacaaacggtgacgacggctcagagggcatgaagttggtcctggagccgccgagaata cactcgcttcccttagtggacatgttgcaactccgcgataaatatcttatcgccggtatt atcgaaatcaccaagaagttgatcaagcgtctgcaagacaacggcatggatcttccgcca aaaacagtcgcctatctcaacaatatgctgaagaagaggaagatgactgatgggcgaacg gactaccccataaagacgaatctcaccaacgagcaacggatcgagctactcaaggcgctc ggggacgatgctgccatcgaagcgcagttcgttggtggaaagcctgtgaagcaggaggtc aagccggttatgaaacaggcaaagcttgatttctcaaaggcatcactcaaagaccacatt gcctcgcttacgcctgcctttgagaaggccactgagaggcggaagaatgctctgttggag acgatgaaggctgaggctccagccaaggctcctcccaaaatcgactcaaaggctgccgac aagatcaaggaggctaggcggcttgagcgagaagccaaggccaagcgagatgctgaggcc atcgcgagggcaaaggccctgcgtgcgccaccgaagctggtccagggagaaggctcaggt ctggctggtgttgctggagttcgtggcaaagaccacgccccagtgctgaaggatgagatc atggttggttcatcatcggaagacgaagatgagtctgacgatgacgagttgatcacactc catgccgctggaaagaagaatatgactgaggccgagcgtcgcgcccatcggttgttggct gagaagatgcgcggaccggtgaagaaggtcaagatcgagcggtccgccaaggatatgcgc gctcgccttattccccctatggatgtgttgcaccaggccatcttggagtgggacatcttc cacgaaggtaacgatccgccgaacgggtaccgttgtgatcacgtctcggatacctaccag gacccggtcagctacaagcaaaccttctttccgttgctcatcaatgaagcctggcgctcg tttgtcacagccaaggatgaaaccacgtccaagccctttggcatcaaggtacttagtcgc atgacagtcgacaagttcatggaagttacggcgtcggttccagttgcaatcaacaaagac cgtcaattgtctgaaggagatattgtcatcatttccaagggccaaaacccgcttcaagag ccagaagagctacactgtctttcgcgtatctggaagacaacttacaaaaaagacaatgtg gaggtcgtctaccgcctgaatgccaaagggaaccaaattctacctgcgctactgcctggc tcggagtttaccgttgtcaagatcaccaacatgacgaccattgaacgcgagtatgccgcc ctggaaagtttacagtactatgatcttatggacgaggtattgagggctgaaccgtctcct atgctgtcttttggcgaggagaacatcaagaacaccatgaaaaactggaatcttaaccca ggtcaagcgaaggcgatcctgaacgccaaggagaacgatgggttcacccttatccagggt cctccaggtaccggtaaaactaagaccattgtggcaatggttggctgtcttctgaccggc gtgctcaaaaaccctaccgctggggtggccattgggcgtccgggactcggagctgcgaag aacaacgctccagcaaagaagctgcttgtttgcgcgcccagtaatgccgctgtggacgaa ttggtgttgcgcttgaagaatggtgtcaagacccagaacggaacaactcaccaaattgag gtggtccgtctcggtcgcagtgatgccatcaacagcgcagtcaaggatgtcacgcttgat gagctggtcaaggcgaaactcgaggctcagttgaacaaggatgaaggcccgactgaccgg gagaagctgcaccaagaagcgggcgagatcaagcagaagattgccgaactcagacctcaa ctggaagcagcgcgcacgattgacgacaggcagctggtcaacaaatatcagcgggagttc gacgaactcaagcggcgccaggcgcacatcggagcgcgcatcgatgcggataaagctagc ggcaacacatttgctagagagaccgaaatcaaacgccgacaggtccagcaggagattctg gacaaggctcaggtgctgtgcgccactctcagcggtagcggtcacgagatgttcaagaac ttgaacgtggagtttgagacggtcatcatcgatgaggcggcgcagtgtgtggagctcagt gcgctcattcccctgaagtacggatgctccaagtgcattcttgtcggtgatcctaagcag ttaccacctaccgttctctcgcagtccgctgcacggtacggctacgaccagagtttgttc gtccgcatgcagaagaatcacgagaaggacgtacatctcctcgacacccagtatcgtatg catcctgaaatcagctccttccccagagccgccttttacgaaggtctcctacaagacggt gacgacatggccaaatcgcgcctccagccctggcaccgcagtactttgcttggtccgtac cgcttcttcgacgtccgcggctcgcaggagcggggaccaaagaatcagtctctggtcaac gaagaagaactcaaggtcgccatgcaactttatcgccgtttcaaggccgattacggcaat gtcgacctcaagggcaagatcggtattatcactccttacaaggcccagctgtaccggctg cggtctcagtttgcccagcgcttcggcgacgccatcacggacgaaatcgagttcaatacc actgatgccttccaaggacgagagtgcgagatcattattttctcatgcgttcgtgccagc cccacaggtggtatcggtttcatgacagatatccgtcgtatgaacgtcggtctcacgcgt gcgcggtcttcactgtggattctcggtgattcccgcgctctcatgcagggtgagttctgg gcgaaactcattgaggattctaagcggcgcgataggtataccacgggaaatatcatgggc atgctaagccaggcggggccacagctgtctgctgcggcgttcgaggctctggcgattact agcactggtaataccagggaaagtacgccaagcggtatcaagcgggaggtggtcgaggtg aaggacgaggatagcgatgtgcaaatgggggatcgatcgtcctttagggggtcttctcct ccggctgctgctgttggcggcagcagtgcgatgggttcgtccagacctccctccggacgc aatactccaagtcataccgggaacgggttcggaagttcgcctgccccgcagcagccgcag ccaacacagtacagggaaggcttgccggtcattcaggagacgactttcacgccgagggta aagaagaggccgtatgagggaggagggggtgatcaacctggcaagaagcaacacatcgac cccatcgccagcagagcccccaaggggcccaggggttacaaccccaataccaacaacctt ccaccaagaccaccgccgcaggcgccgagtgacccctcagcgatggaagttctggggttg gcaccccctaccagagcaccggctgctcggcagcagcagcagcagcaaccgcagtacgac tatcaacctcagcagcctcctcaataccaacctcgtcctcaacaaggagctccgcctccg tatccgggccatcagcaacagcgacaaccgcctgctggtccttctcgacccggtcctcca actggaccaagcagactgggtggtagtggtacaggttaccagcagcagcagcaacaacaa ccgcaacagcaacaacaacaacaacagagaccgccgccgatagtaaagaagaaggcgcct gttgatccgttcatcaagcggaagaagaggtga

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