Neurospora crassa: NCU02230
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Entry
NCU02230 CDS
T01034
Symbol
msh2
Name
(RefSeq) mutS ortholog 2-like
KO
K08735
DNA mismatch repair protein MSH2
Organism
ncr
Neurospora crassa
Pathway
ncr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ncr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
NCU02230 (msh2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncr03400
]
NCU02230 (msh2)
DNA repair and recombination proteins [BR:
ncr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
NCU02230 (msh2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_I
MutS_IV
AAA_22
AAA_27
Motif
Other DBs
NCBI-GeneID:
3875790
NCBI-ProteinID:
XP_959643
UniProt:
O13396
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All DBs
Position
VII:3257889..3261513
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AA seq
937 aa
AA seq
DB search
MSSRPELKVDDEHGFIRFYKSLPQLGEEAIRIFDRGDWYTAHGDDATFIARTVYKTTSVI
RQLGRSDHTGLPSVTMTVTVFRQFLREALFKLGKRIEIWASPSGRMNWKVVKQASPGNLQ
DVEDELGGQFEGAPVILAVKISAKASEARTVGVCFADASVRELGVSEFLDNDLYSNFEAL
LIQLGVKECIVTQDKGEKEKDPELAKLRQIIDNCGVAIAERSAGEFGTKDIEQDLSRLLK
DERAASLLPQTDLKLAMGSASALIKYLGILHDPSNFGQYQLYQHDLAQFMKLDAAALKAL
NLMPGARDGAKNMSLYGLLNHCKTPVGSRLLSQWLKQPLMNAEEIEKRQQLVEAFANDTE
LRQSMQEEHLRSIPDLYRLSKRFQRGKATLEDVVRAYQVVIRLPGFIGTLEGVMDEAYRD
PLDEVYTNKLRELSDSLVKLQEMVETTVDLDALDNHEFIIKPEFDDSLRIIRKKLDRLRT
DMDNEFAEAAEDLGQEREKKIFLENHKVHGWCMRLTRTEAGCIRNNSRYLECSTQKNGVY
FTTKTLQALRREFDQLSQNYNRTQSSLVNEVVGVAASYCPVLERLAAVLAHLDVIVSFAH
CSVHAPISYVRPKIHPRGTGRTVLTEARHPCMEVQDDVTFITNDVTLTREDSSFLIITGP
NMGGKSTYIRQIGVIALMAQIGCFVPCSSAELTIFDSILARVGASDSQLKGVSTFMAEML
ETANILKSATAESLIIIDELGRGTSTYDGFGLAWAISEHIVKEIGCFALFATHFHELTAL
ADQYPNVKNLHVTAHISGTDTDTDVITDEDEKAKKKREVTLLYKVEPGICDQSFGIHVAE
LVRFPDKVVRMAKRKADELEDFTSKHEEENGGGLGVQYSKQDVEEGSALLKDVLVKWKDE
VKSGRMSKEEMVARLKELVQKDERLLGNPFFKSVQAL
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccagaccagagctcaaggtcgacgacgaacatggcttcattcgcttctacaag
tccctgccccaacttggcgaagaggccatcaggattttcgacagaggcgactggtacaca
gctcacggcgacgatgccaccttcattgcccgaaccgtctacaagacaacatccgtcatt
cgccagctaggtcgaagcgaccataccggccttccatcagttaccatgaccgtgaccgta
ttccggcagttcctgcgtgaagctctgttcaagctagggaagcgaatcgagatttgggcc
agtcccagtggccgcatgaactggaaggtcgtcaagcaggcttctccgggaaacctgcag
gacgtggaggatgaactaggtggccagttcgagggagcgcccgtcatcctggcggtcaaa
atctcagcaaaggcttcggaagccagaacagtgggagtgtgctttgccgatgccagtgtg
cgggaactgggagtcagcgagttcctcgacaatgatctatactccaacttcgaagcgttg
ctcattcaactaggcgtcaaggagtgtatcgtcacacaggacaagggcgagaaggaaaag
gacccagagttggccaagttgaggcagatcatcgacaactgcggtgttgccatagcagag
aggtctgcgggcgagttcggcaccaaggacattgagcaagatttgtcacggctattgaag
gatgagcgcgctgccagcttgctcccacaaaccgacttgaaactcgccatgggatctgcc
tcggccctgatcaagtacctaggcatactgcatgatccgtccaattttggccagtatcaa
ctgtaccagcatgacttggcccagttcatgaagctggatgcggcagcattgaaggctctc
aacctcatgcctggtgctagagatggcgcaaagaacatgagtctgtatgggttattgaac
cactgtaagactcctgtgggaagcagactactgtcccaatggctcaagcagcccctgatg
aatgccgaggaaattgagaagcgccagcaactggttgaggcctttgccaatgacaccgag
ctacgacagtcaatgcaggaggaacatcttcgatccatccctgacttatatcggctgtcc
aagcggttccagcgtggtaaagcaacactagaggacgttgtgagggcatatcaagtggtt
atacgcctgcccggctttattggaaccctcgaaggcgtgatggatgaagcctaccgcgac
ccgcttgatgaggtctacaccaacaaactccgcgagctctcagacagcctcgttaagctg
caggaaatggtcgagaccacagttgaccttgacgccctggacaatcacgagtttattatc
aagcccgagttcgacgatagcctacgcatcatccgcaagaagctcgaccggcttcgcaca
gacatggacaacgagttcgccgaagccgccgaggacctcggccaggagcgcgagaaaaag
atcttcctcgaaaaccacaaggttcacggctggtgcatgcgtctgacccgcaccgaggct
ggctgcatccgcaacaactcacgctaccttgagtgctcaacccagaagaacggtgtctac
ttcaccaccaagaccctccaagctctccgccgcgagttcgaccagctctcccagaactac
aaccgcacccagagcagtctcgtcaatgaagtcgtcggcgtggccgcctcatactgccct
gtcctcgagcggctcgccgccgttctcgcccacctcgacgtcatcgtctcctttgcgcac
tgctccgtccacgctcccatctcctatgtccggcccaagatccaccctcgcggaaccggc
cgcaccgtcctcaccgaagcccgccacccgtgtatggaagtccaagacgacgtaaccttc
atcaccaacgacgtcaccctcacgcgcgaggactcgtccttcctcatcatcaccggcccc
aacatgggcggcaagtcgacatacatccgacagattggtgtgatcgcgctcatggcgcaa
ataggctgcttcgtgccctgctcatcagcagaactaaccattttcgacagcattctcgcc
cgcgtcggcgcgtccgactcgcagctcaagggcgtgtcgacctttatggccgagatgctg
gagacggccaacattctcaagtcggccacggccgagagcctgatcatcatcgacgagctc
ggccgcggcacatcgacgtacgacggctttggtctcgcctgggccatctcggagcacatc
gtcaaggagattggctgcttcgcactgttcgccacccatttccacgagttgaccgcgctg
gcggaccagtatcctaacgtcaagaacctgcacgttacggcgcacatcagcggcactgac
actgacaccgatgtaatcaccgacgaagacgaaaaggcaaagaagaagcgcgaggtaacc
ctcctatacaaagtcgaacccggcatctgcgaccagagcttcggtatccacgtcgccgag
ctggttcggttcccagacaaggtggtgcgcatggctaagcgcaaggcagacgagctggag
gactttaccagcaagcatgaggaggaaaacggggggggtctaggtgtccagtacagcaag
caggacgtggaggagggtagtgcgctgttgaaagacgtactggtgaaatggaaggatgag
gtgaagagtgggcggatgagtaaagaggagatggtggcgaggttgaaggagttggtacag
aaggatgagaggttgttggggaatccgttctttaagagtgttcaggctttgtga
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