Neurospora crassa: NCU02256
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Entry
NCU02256 CDS
T01034
Name
(RefSeq) exosome complex exonuclease Rrp6
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
ncr
Neurospora crassa
Pathway
ncr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ncr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCU02256
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncr03019
]
NCU02256
Messenger RNA biogenesis [BR:
ncr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
NCU02256
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Mitofilin
Motif
Other DBs
NCBI-GeneID:
3876086
NCBI-ProteinID:
XP_959900
UniProt:
Q7S5A8
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All DBs
Position
VII:complement(3162748..3165711)
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AA seq
822 aa
AA seq
DB search
MDGSLDFKSLRESLQAALVATTRTANSIASEDLQFQRTVNPTVGGQLDNSSGRLLSLANG
LLKSTANLTGQKVGALEDADDVDIQWRNIVDVIDSLLEKADTCLDEYTGLIKRKDAPTPA
DQGRAQKRVKSSNDRLDWSLKRANILKPQNNFEKKVDNFATGPWKPLLSSKPHAKVSLED
SLTTFVDDDNNTQYKHPYETEIKTTPYPEHVYKKREPKEYLPIDSTSAIWVDTYEGVLEM
LEELKQAKEIALDLEHHDFRSYTGLLSLMQISTREKDWVIDTLQPWRHKLEVLNEVFANP
NIVKVLHGAFMDVIWLQRDLGLYVVGLFDTYHACAVLGYPGRSLGYLLSKFAEFEADKKY
QLADWRIRPLPEEMFYYARSDTHYLLYIFDMIINELVERSTPGKPKPDLLEQVLERSKDV
ALQRYENLSYNVETGQGPRGWYNVLLKSPTLYNGEQFAVYKAVHQWRDNLARREDESPFF
FMTQQVLADIARILPTDKKALWSILDSNAKGLKSHLDDLFDVIQKAREEGVNGPKMMDIF
KSESSILAPAKIAAVIADDSDIPDVKELKADRSQFWGGVTLSSVWDGTAAKTAKLDDVLE
ITLPYPADFMDGSTAEMEVDQPEEAVPEPQPAPEEVIVNQEFTLRNGGKRKREEESEEEE
EASDAEMEDSAPQTETDVQTGGEAEGDDSDEEEEEEEEEASDKSSKKSKKAARKAAKEKK
KQAKEALKAQRRAEKAAKKEAKKKAQEEAAAAAKQAEGEEKEDQPFDYSQAASVLRARKT
QEDVKKANKRFNPYENKSQGGPKGARAHYTAKAAGRTATFKK
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atggacggctcactggacttcaagagcttgagggaatcgctccaagccgccctggtcgct
acgacccgaaccgccaactcaatcgccagcgaggatcttcagttccagcgcaccgtcaac
ccgactgtcggtggtcaactcgacaacagctccggccgccttctgtccctggccaacggg
ctcctcaagtcgaccgcgaatcttaccggccagaaggttggcgctcttgaagatgccgac
gacgtggacatccaatggcggaacattgtcgacgtgatcgactcgttgctcgagaaagcc
gacacctgcctcgacgagtacaccggattgatcaagcggaaggatgcgcctacccccgcc
gaccagggccgcgcccaaaaacgcgtcaagtcgtctaacgatcgtcttgactggtccttg
aagagagccaacattctcaaaccacagaataacttcgagaagaaggtcgataacttcgct
accggtccttggaagcctctgttgtcgtccaagcctcatgccaaggtgtcactggaagac
agcctgaccacctttgtcgatgatgacaacaacacacaatacaaacacccctacgaaacc
gagatcaagacgacaccgtaccctgagcatgtgtacaagaagcgcgaacccaaggagtac
cttcctatcgattcgacatccgccatctgggttgatacttatgagggcgtcttggagatg
ttggaggagctcaagcaggccaaggaaattgcgcttgatctggagcaccacgattttagg
tcttacaccggactgttgtctctcatgcagatcagtaccagagagaaggattgggtcatt
gatactcttcaaccttggaggcacaagcttgaggttctgaatgaggtttttgcgaacccc
aacattgtcaaggttcttcacggtgctttcatggatgtcatctggctgcagagagatctt
ggtctctacgttgtaggtctcttcgacacatatcatgcttgcgccgttctcgggtaccct
ggaaggagcttgggttatttgcttagcaagtttgccgagttcgaagccgacaaaaagtat
cagcttgcggactggcgcatcagacctctccccgaggagatgttttactatgcgcggtcg
gatacccactacctgctctacatcttcgacatgatcatcaacgagctcgtggagcgctca
acacccggaaagccgaagcctgaccttctcgagcaggtcctcgagaggtccaaggatgtc
gccctgcaacgatacgagaaccttagctacaacgtcgaaaccggccagggaccccgcggg
tggtataatgtgctgttgaagtccccaacgctctacaacggcgagcagtttgccgtctac
aaggccgtacatcaatggcgtgacaacttggctcgtcgtgaggacgagagtcccttcttc
tttatgacacagcaggttctggccgacattgcccggatactcccgaccgacaagaaggct
ctgtggagtattctggatagcaacgccaagggcctcaagtctcatttggatgatctattc
gacgtcattcaaaaggctagggaggaaggtgtgaacggtcccaagatgatggatatcttc
aagagcgagtcatctatcctcgcccccgccaagattgctgcggtcatcgccgacgatagc
gacattccggacgtcaaggagctcaaagctgaccggtcacaattttggggcggcgtcact
ctgagctcagtctgggacggcacggctgcgaagactgccaagcttgacgacgtgttggaa
atcacccttccgtatccggccgacttcatggacggatctacggctgagatggaggtggat
caaccagaagaggcggtgccagagccccagccggcgccggaagaggtgatagtcaaccag
gaattcactcttaggaacggaggcaagcgcaagcgcgaggaagagtctgaggaagaagag
gaggcctcagatgccgaaatggaggattccgcgcctcagaccgaaaccgacgtgcaaacc
ggtggtgaagccgaaggtgacgactccgacgaggaagaagaggaggaggaggaagaggca
agcgacaagtcatccaagaaatccaaaaaggcagccaggaaagcggccaaggagaagaag
aagcaggccaaggaagctctcaaggcccagcgaagggcagagaaggccgccaagaaggaa
gcaaagaagaaggcgcaggaagaagctgctgctgccgctaagcaggcggagggcgaggag
aaggaagatcagccgtttgattactctcaggctgcgtcggtgttgcgtgctcgcaagact
caggaggacgtcaagaaggcgaataagaggtttaacccgtatgaaaacaagtctcaggga
ggacccaagggcgcaagagcgcattacacggccaaggcggctggcaggacggctaccttt
aagaagtga
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