KEGG   Neurospora crassa: NCU02256
Entry
NCU02256          CDS       T01034                                 
Name
(RefSeq) exosome complex exonuclease Rrp6
  KO
K12591  exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
ncr  Neurospora crassa
Pathway
ncr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ncr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    NCU02256
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ncr03019]
    NCU02256
Messenger RNA biogenesis [BR:ncr03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Exosome cofactors
     NCU02256
SSDB
Motif
Pfam: DNA_pol_A_exo1 PMC2NT HRDC Mitofilin
Other DBs
NCBI-GeneID: 3876086
NCBI-ProteinID: XP_959900
UniProt: Q7S5A8
LinkDB
Position
VII:complement(3162748..3165711)
AA seq 822 aa
MDGSLDFKSLRESLQAALVATTRTANSIASEDLQFQRTVNPTVGGQLDNSSGRLLSLANG
LLKSTANLTGQKVGALEDADDVDIQWRNIVDVIDSLLEKADTCLDEYTGLIKRKDAPTPA
DQGRAQKRVKSSNDRLDWSLKRANILKPQNNFEKKVDNFATGPWKPLLSSKPHAKVSLED
SLTTFVDDDNNTQYKHPYETEIKTTPYPEHVYKKREPKEYLPIDSTSAIWVDTYEGVLEM
LEELKQAKEIALDLEHHDFRSYTGLLSLMQISTREKDWVIDTLQPWRHKLEVLNEVFANP
NIVKVLHGAFMDVIWLQRDLGLYVVGLFDTYHACAVLGYPGRSLGYLLSKFAEFEADKKY
QLADWRIRPLPEEMFYYARSDTHYLLYIFDMIINELVERSTPGKPKPDLLEQVLERSKDV
ALQRYENLSYNVETGQGPRGWYNVLLKSPTLYNGEQFAVYKAVHQWRDNLARREDESPFF
FMTQQVLADIARILPTDKKALWSILDSNAKGLKSHLDDLFDVIQKAREEGVNGPKMMDIF
KSESSILAPAKIAAVIADDSDIPDVKELKADRSQFWGGVTLSSVWDGTAAKTAKLDDVLE
ITLPYPADFMDGSTAEMEVDQPEEAVPEPQPAPEEVIVNQEFTLRNGGKRKREEESEEEE
EASDAEMEDSAPQTETDVQTGGEAEGDDSDEEEEEEEEEASDKSSKKSKKAARKAAKEKK
KQAKEALKAQRRAEKAAKKEAKKKAQEEAAAAAKQAEGEEKEDQPFDYSQAASVLRARKT
QEDVKKANKRFNPYENKSQGGPKGARAHYTAKAAGRTATFKK
NT seq 2469 nt   +upstreamnt  +downstreamnt
atggacggctcactggacttcaagagcttgagggaatcgctccaagccgccctggtcgct
acgacccgaaccgccaactcaatcgccagcgaggatcttcagttccagcgcaccgtcaac
ccgactgtcggtggtcaactcgacaacagctccggccgccttctgtccctggccaacggg
ctcctcaagtcgaccgcgaatcttaccggccagaaggttggcgctcttgaagatgccgac
gacgtggacatccaatggcggaacattgtcgacgtgatcgactcgttgctcgagaaagcc
gacacctgcctcgacgagtacaccggattgatcaagcggaaggatgcgcctacccccgcc
gaccagggccgcgcccaaaaacgcgtcaagtcgtctaacgatcgtcttgactggtccttg
aagagagccaacattctcaaaccacagaataacttcgagaagaaggtcgataacttcgct
accggtccttggaagcctctgttgtcgtccaagcctcatgccaaggtgtcactggaagac
agcctgaccacctttgtcgatgatgacaacaacacacaatacaaacacccctacgaaacc
gagatcaagacgacaccgtaccctgagcatgtgtacaagaagcgcgaacccaaggagtac
cttcctatcgattcgacatccgccatctgggttgatacttatgagggcgtcttggagatg
ttggaggagctcaagcaggccaaggaaattgcgcttgatctggagcaccacgattttagg
tcttacaccggactgttgtctctcatgcagatcagtaccagagagaaggattgggtcatt
gatactcttcaaccttggaggcacaagcttgaggttctgaatgaggtttttgcgaacccc
aacattgtcaaggttcttcacggtgctttcatggatgtcatctggctgcagagagatctt
ggtctctacgttgtaggtctcttcgacacatatcatgcttgcgccgttctcgggtaccct
ggaaggagcttgggttatttgcttagcaagtttgccgagttcgaagccgacaaaaagtat
cagcttgcggactggcgcatcagacctctccccgaggagatgttttactatgcgcggtcg
gatacccactacctgctctacatcttcgacatgatcatcaacgagctcgtggagcgctca
acacccggaaagccgaagcctgaccttctcgagcaggtcctcgagaggtccaaggatgtc
gccctgcaacgatacgagaaccttagctacaacgtcgaaaccggccagggaccccgcggg
tggtataatgtgctgttgaagtccccaacgctctacaacggcgagcagtttgccgtctac
aaggccgtacatcaatggcgtgacaacttggctcgtcgtgaggacgagagtcccttcttc
tttatgacacagcaggttctggccgacattgcccggatactcccgaccgacaagaaggct
ctgtggagtattctggatagcaacgccaagggcctcaagtctcatttggatgatctattc
gacgtcattcaaaaggctagggaggaaggtgtgaacggtcccaagatgatggatatcttc
aagagcgagtcatctatcctcgcccccgccaagattgctgcggtcatcgccgacgatagc
gacattccggacgtcaaggagctcaaagctgaccggtcacaattttggggcggcgtcact
ctgagctcagtctgggacggcacggctgcgaagactgccaagcttgacgacgtgttggaa
atcacccttccgtatccggccgacttcatggacggatctacggctgagatggaggtggat
caaccagaagaggcggtgccagagccccagccggcgccggaagaggtgatagtcaaccag
gaattcactcttaggaacggaggcaagcgcaagcgcgaggaagagtctgaggaagaagag
gaggcctcagatgccgaaatggaggattccgcgcctcagaccgaaaccgacgtgcaaacc
ggtggtgaagccgaaggtgacgactccgacgaggaagaagaggaggaggaggaagaggca
agcgacaagtcatccaagaaatccaaaaaggcagccaggaaagcggccaaggagaagaag
aagcaggccaaggaagctctcaaggcccagcgaagggcagagaaggccgccaagaaggaa
gcaaagaagaaggcgcaggaagaagctgctgctgccgctaagcaggcggagggcgaggag
aaggaagatcagccgtttgattactctcaggctgcgtcggtgttgcgtgctcgcaagact
caggaggacgtcaagaaggcgaataagaggtttaacccgtatgaaaacaagtctcaggga
ggacccaagggcgcaagagcgcattacacggccaaggcggctggcaggacggctaccttt
aagaagtga

DBGET integrated database retrieval system