Neurospora crassa: NCU02354
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Entry
NCU02354 CDS
T01034
Symbol
pbd-1
Name
(RefSeq) porin-binding domain protein-1
KO
K11756
chromatin structure-remodeling complex subunit RSC1/2
Organism
ncr
Neurospora crassa
Brite
KEGG Orthology (KO) [BR:
ncr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncr03021
]
NCU02354 (pbd-1)
03036 Chromosome and associated proteins [BR:
ncr03036
]
NCU02354 (pbd-1)
Transcription machinery [BR:
ncr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
RSC complex
NCU02354 (pbd-1)
Chromosome and associated proteins [BR:
ncr03036
]
Eukaryotic type
Chromatin remodeling factors
RSC complex
NCU02354 (pbd-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
BAH
DUF7877
Motif
Other DBs
NCBI-GeneID:
3875922
NCBI-ProteinID:
XP_959775
UniProt:
Q7S4X1
LinkDB
All DBs
Position
VII:complement(2780125..2785750)
Genome browser
AA seq
1206 aa
AA seq
DB search
MPTLRERPSRGDSSPAKRNTTSSAAAPTRTAARTTPRTTRRQSSNTNSNIMAAAPARDAI
EVRESIEAKGDVDDDVDMEDADAKDDEPRKPTDKDQDADMADDREDDEDEDHDQDEEDEE
ESDSAKDLLQLIRDTSEYLCRYTIKVDGEDYEIASGFQRLVNKRSLPDYFEVIKTPMAFS
TIRGKLGKKSYTSFNEFVQDVTRICHNAQVYNRPSAPIFSDAGRLLEVFKGKLAELVRKG
DITEKDAEIPDYGPLPEFEDSPTPEEEEDEEEEEEEEEESESDDSDAVDSDGRRRRGRRR
GGRSRRRKQDDDDDEAQKKHTRPLKVLTPQEARIQALLKGLRKFKNENGHVRINHFQRLP
DKSESPGYYAAVRNPIALDMIIRKHKRKKYQYLDQVLQDLELMFENAKLFHEQGSEEYED
AVELQKEARALTEQEKAKPDDDFRDADGKLPLDSIEHGGELWRVGDWVHIRNPNDLSKPI
VAQIYRMWSDKSGQKWVNACWFYRPEQTVHRYDKFFYENEVVKTGQYRDHRIEEIEDRCF
VMFITRYPKGRPRGLPYNKMVYVCEARYNEEKCKFNKVKTWSSCLPEEVRDQDYEMDLWP
VPRTMRKIPSPIKHLLQADAKETDDLPKPTWRSPNAPPLIGAVHRRPREPNESPPPEAHP
TFIAPVPLAIGPGPGSGSSHRQSFSGGVPGTPTFHPSVAPAPGPGGHVAFGGQHYVQHFA
PRQQQQQQQQQQQQQQPPPQGHGIAPHIVQIHGHPQSHPPPPIHQYQPQLQPHPHQGLHQ
QPLGPQHQHQPMPGMPMHVQPHHPGMPPMQPSPHYYPHQQPPSYSHQQPPPYHGPGPQHV
PIPQPPHQPPPPPPQQQQLQQQQQQQLHQPYQQIQYIHHGPPTTQSQLAPAPPPGPQYDP
HHPHSRPVHAHPPPPPPPQQQQPFGVGLPHHPGVPIGLPVAHHSHSHPQPSPIAPNFPTP
NRHHQPPPMGTPMQQHPPTMPQQLAPGSAAGNAYNAPRAPEVYTLAENIDSEIPEEVKKQ
FQTDDQGRVLFFTAPPLNRASVRNGGVAEQYAGLGHSVHWESIKALKEERRRKRKERDEA
LQEEANKRKAAKTAEAKANGEGDEHKKALSLLEEGILQWCEQMQKGTKHLEELLGGREGW
EEMMRQSKEENKGLTEAEIRKKSLRWWLEDQIKKGLVTEEERKQMEEAFLADAKGLTSVK
ATGLKA
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atgcccactttgcgcgagcgccccagcagaggcgactcctcccccgccaagaggaacacc
acttcttcagctgctgccccgaccaggacagccgccagaaccacccccagaaccacgcga
cgacagtccagcaacaccaatagcaatattatggctgctgccccggcccgtgacgcgatc
gaggtacgcgagtccatcgaggccaagggcgacgtcgatgacgatgtagacatggaggat
gccgatgccaaagacgacgagccgcgcaaacccaccgacaaagaccaagatgcggacatg
gccgatgaccgagaagacgacgaggacgaggaccacgatcaggacgaagaagacgaagaa
gagagtgattctgccaaggatctcttacagctaatcagagacacgtccgagtacctgtgt
cggtacaccatcaaggtggatggagaggactacgagattgcctctggcttccagaggtta
gtcaacaagcggagtcttcccgattactttgaggttatcaagacccccatggccttcagc
accatcaggggtaagctgggcaaaaagagctacacaagcttcaacgaattcgttcaagac
gtgacgcgcatatgccacaacgcacaagtttacaatagaccctccgcccccatcttctcc
gacgccggtcggttgctcgaggttttcaaaggaaagcttgccgaactcgtccggaagggg
gacattaccgaaaaagacgccgagatccccgactacggtccgttacccgagtttgaagat
tcgccaacccccgaagaggaagaggatgaggaagaggaggaagaggaggaggaagaatca
gaatcggatgactcggatgctgtcgactcggatgggcggcgccggcgtggacggagacgc
ggtggccggtctcgaagaaggaaacaagatgacgacgatgatgaggcccaaaagaagcac
acgagacccctcaaggtcctcacgccgcaagaggccaggatacaggccctactcaagggg
ctgcggaaattcaaaaacgaaaatggccatgtgcgcatcaatcactttcagaggctccct
gacaagtcagaaagcccgggttactacgccgccgtgcgcaacccaattgcgttggatatg
atcatcaggaagcacaagcgtaaaaagtaccaatatctcgaccaagtcctccaggacctg
gaactcatgtttgagaatgccaagctcttccacgaacaggggagtgaagagtatgaagat
gcggttgaactacaaaaagaggcgcgcgccctcacggagcaggaaaaggccaagcccgac
gatgactttcgcgacgcagatggaaagctgcccttggacagcattgagcacggaggcgag
ctgtggcgagtgggtgattgggttcacatccgtaaccccaacgatctttccaagcccata
gtcgcgcagatctaccgcatgtggtcggacaagtctggccagaagtgggtgaacgcctgc
tggttctatcgcccagaacagacggtccatcgctatgacaagttcttttacgagaacgag
gtggtcaagacaggccagtatcgcgaccaccggatcgaagaaatcgaggaccgatgcttc
gtcatgttcattacccgctaccccaagggccgccctcgcggattgccctataacaagatg
gtgtatgtctgcgaggcgcggtacaacgaagagaaatgcaagttcaacaaggtcaagacg
tggtccagctgtctgcccgaagaggttcgcgaccaggactatgagatggatctctggcct
gtgccgcgcaccatgaggaagatccccagtcccatcaagcatctgctgcaagccgacgcc
aaagagacggacgacttgccgaaaccgacgtggagaagcccgaatgcgcctcccctcatt
ggggcggtccatcgtcgccctcgtgagcccaatgagtcgcctccgccagaagctcaccca
acattcatcgcgcctgtgccgctggctattggtcctggccctggctccggatcatcgcac
cgtcagtccttctctggtggtgttccaggaacaccaacattccatccgtctgtcgctccc
gcgcctggacctggtggacacgtcgcgtttggaggtcaacattacgtgcagcattttgca
ccacggcaacagcagcagcagcagcagcagcaacagcagcagcagcagccgccaccccag
ggtcacggcatcgctcctcacatcgtccagattcacggtcatccgcagtcgcacccgccg
ccgccgatccatcagtatcaaccgcagctgcaaccacatccccatcagggtctccatcag
cagccactaggaccccagcaccagcaccagccaatgcccggcatgcccatgcacgtgcag
ccccatcatcccgggatgcccccgatgcagccaagcccccattattacccacaccagcag
cctccttcttactcgcaccaacaacctcctccgtaccacggtcccgggccacaacacgtc
ccaattcctcagcctccacaccagccgccgccgccgccgccgcagcaacaacaacttcaa
caacaacaacaacaacaacttcaccagccctaccagcaaattcaatacattcaccacggc
cccccgaccacacaaagccagctcgctccggcgccgcctcccgggccccagtacgacccc
catcacccacattccaggccggtgcacgcgcacccgccaccaccaccaccaccacaacaa
caacagccctttggagtcggtctaccgcaccaccctggtgtacccataggcttgccggta
gcgcatcactcccattctcatccgcagccgtcgccaatagcgcccaatttccccacgccc
aacaggcaccaccagccacctccgatgggaactcccatgcagcagcacccaccaaccatg
ccacagcagctcgccccaggttcggccgctggtaatgcgtacaacgcgccgcgtgccccc
gaggtctacacccttgccgagaacatcgacagtgagatcccggaggaggtgaagaagcag
tttcagacggacgaccaaggacgtgtcctctttttcaccgcgccgccccttaaccgggct
tctgttcgcaatggtggcgtggcggagcagtacgctgggttgggtcacagtgttcactgg
gagagcatcaaagctctcaaggaggagcggaggcgcaagaggaaggaacgggatgaggcg
ctgcaggaagaggcaaacaagcgcaaagctgccaaaacagccgaggccaaggcgaatggc
gaaggggatgagcacaaaaaggcactgagtctgctggaggagggcatcctccagtggtgc
gagcagatgcagaaggggacgaagcatttggaggaattgctagggggcagggaggggtgg
gaagagatgatgaggcagagtaaggaggagaacaaggggctaacggaggcggagattagg
aagaagagtttaaggtggtggcttgaggatcagatcaagaagggcttggtcacggaggag
gaaaggaaacagatggaggaggcttttctggccgatgcaaagggtttgacgagcgtcaag
gcaacggggttgaaggcttaa
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integrated database retrieval system
