Neurospora crassa: NCU02460
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Entry
NCU02460 CDS
T01034
Symbol
syn-1
Name
(RefSeq) syntaxin-1
KO
K08486
syntaxin 1B/2/3
Organism
ncr
Neurospora crassa
Pathway
ncr04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ncr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
NCU02460 (syn-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncr04131
]
NCU02460 (syn-1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ncr04147
]
NCU02460 (syn-1)
Membrane trafficking [BR:
ncr04131
]
SNARE
Syntaxin (Qa)
Stx-PM
NCU02460 (syn-1)
Exosome [BR:
ncr04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
NCU02460 (syn-1)
Exosomal proteins of other body fluids (saliva and urine)
NCU02460 (syn-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNARE
Syntaxin
Syntaxin_2
Spectrin
LMBR1
ALIX_LYPXL_bnd
Orf78
RNF152_C
PIN_12
Spectrin_Anc-1
Synaptobrevin
PspA_IM30
Motif
Other DBs
NCBI-GeneID:
23568390
NCBI-ProteinID:
XP_011395189
UniProt:
V5IMH2
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All DBs
Position
VII:complement(2105240..2109312)
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AA seq
470 aa
AA seq
DB search
MSYGYGGRDPSFDQRDGAAGAYSPLGERDQSPASYAGGNYGGNNMEMSSITTGGLYGGDP
TAILNECRDIDNGIEQIEANLRELRRLQDRCLAEADSSASSSSRQLDTLNTETMALYRTI
TDRVRKIKSSPEGRQPRNQAQVGRVDRRLRQAIQDYQGVESSFRKKMQEQMARQYRIVRP
DATEDEVKAAVEDTTGNSQVFQQALMQNNRVGEARAVLSAVQDRHKALQRIEQQMVELAQ
LFEQLNTLIVEQDVKIQAIEQTSEEVVDNLDKGNEEIAVAVQTARATRKKKWMCLGICVA
IIVVIVIIVVVYVVVTHPPGGGNRPAQNTKRGLLQRSFPDDLQMNNARAIQIAAPMAGPI
SRIHRQSNYVVPDSADSESLVKRLSPEAFDRIISPYKQAPAGATNAKRFVITDEILEFME
QNNAVASRGPHRAGKRFVITDEILESMRGGQVADHKKFVPGHHNDAKDGK
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgagttacggatacggtggaagagatccttccttcgaccaacgggatggtgccgctggt
gcttattccccgcttggtgaaagggaccagtctcccgcctcctacgccggaggcaattat
ggaggaaacaatatggagatgagctcaatcaccactggaggcttatatggcggtgacccg
actgcaattctgaacgagtgccgggacatcgacaatggaatcgagcaaatcgaagcaaat
ctacgcgagctacgaagactgcaggaccgctgcctcgctgaggcggattcatccgctagc
tcatcgagtcggcagctagacacactcaacacggagaccatggccttgtaccgcaccata
actgatcgcgtccgcaaaatcaagtcgagccctgagggccgccagcctcgaaaccaggcc
caggttggccgcgttgaccgccggttgcgacaagcgattcaagactatcagggcgtcgaa
tcctcgttccgcaagaagatgcaggagcagatggcccgccagtaccgcattgtgcgcccc
gatgcgaccgaggacgaggtcaaggccgccgtcgaggacactaccggaaactcgcaggtt
ttccagcaggcattgatgcagaacaatcgcgtgggcgaggcgagagctgtgctcagtgct
gtccaggaccgtcacaaggctttgcagaggattgagcagcaaatggtcgagttggcgcag
ctgtttgagcagttgaacacgttgattgtggaacaggacgtcaagattcaggctattgag
cagacgagtgaggaggtggttgacaatctcgacaaaggcaatgaggagattgcagtggct
gtccagacggcgcgggccacccgcaagaagaagtggatgtgcttgggtatttgcgtggcc
attatcgttgtgattgttatcattgtggtggtatatgttgtcgtcacccatcctccaggc
ggcggaaatcgaccggcgcagaacacgaagcgtggtcttctgcaacgaagctttcccgat
gatctgcagatgaacaacgcccgagctatccagattgccgctcccatggccggccccatc
tctcgtatccacagacagtcaaactacgtcgtccctgatagtgccgactcggagtctctt
gttaagaggctctcaccggaagcgttcgaccgcatcatttcgccctacaaacaagcacct
gcaggagcgacaaacgcgaaacgatttgtaatcacagacgaaatcctcgagtttatggaa
cagaataacgcggtggcttctcgcggccctcatagggccggaaagcgcttcgtcatcacg
gacgaaattctggaaagtatgagaggcggccaagtggcagaccataaaaagtttgttccg
ggtcatcataacgatgcgaaggatggcaaatga
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