KEGG   Neurospora crassa: NCU02753
Entry
NCU02753          CDS       T01034                                 
Name
(RefSeq) WD repeat-containing protein
  KO
K12880  THO complex subunit 3
Organism
ncr  Neurospora crassa
Pathway
ncr03013  Nucleocytoplasmic transport
ncr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ncr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    NCU02753
  09122 Translation
   03013 Nucleocytoplasmic transport
    NCU02753
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ncr03019]
    NCU02753
   03041 Spliceosome [BR:ncr03041]
    NCU02753
Messenger RNA biogenesis [BR:ncr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     NCU02753
Spliceosome [BR:ncr03041]
 Complex C
  Other components
   EJC/TREX
    NCU02753
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    NCU02753
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st WD40 Beta-prop_WDR3_1st WD40_Prp19 WDR55 ANAPC4_WD40 Beta-prop_WDR3_2nd Beta-prop_Aladin WD40_Gbeta EIF3I Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_WDR36-Utp21_1st Beta-prop_IFT122_1st Beta-prop_WDR19_1st WD40_MABP1-WDR62_2nd Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_EML eIF2A Beta-prop_HPS5 Beta-prop_TEP1_C WD40_RFWD3 Beta-prop_WDR35_TULP_N Beta-prop_NUP159_NUP214 WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_Nup120_160 KNTC1_N Cytochrom_D1 Beta-prop_ACSF4 Beta-prop_VPS8 PALB2_WD40 B-prop_COPA_B_2nd Beta-prop_SPT8 Beta-prop_WDR41 Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 3879995
NCBI-ProteinID: XP_963846
UniProt: Q7SCY1
LinkDB
Position
I:complement(3443089..3445401)
AA seq 342 aa
MAPLLRPRYSLPKEKFSAYFGPLKSQSYNDTTSGPRGGGGSHHSLSTIAWNPLGTLIATG
AVDKTLRVWNPEKPNVKFSTELKGHASPIEKVAFNPVKDAELCSVSSDGAVKIWDVRTKA
CVNEVKVSGHATSLAWAPDGSSLLVGSKNGDLFHILPSQSSIISTHHQPVGTNQMAFCWS
GDKVFLPTNEGRIRILSYPDFEPVLHVNYAVPEGESTEFTLKGHTASCLTAELSPTGKYL
ATGGADSIISLFDTKDWICQRTVTRMVGPVKSISFTFDGSYVVGGCEEGGSLEVTHTETG
EHVHTFKTAGTCEAVAWAPTRYCLAYSDLGVLRIIGVDTDRK
NT seq 1029 nt   +upstreamnt  +downstreamnt
atggctccacttctacgccccagatatagcttgcccaaggagaagttttcggcgtacttt
ggacccctcaagagtcagtcttacaacgacaccacctccgggcctcgggggggtggtgga
agccatcacagcctaagcacaatagcctggaaccccttgggaactcttattgccactggt
gctgttgacaagacacttcgtgtctggaatcccgagaagcccaatgtcaaattttcaacc
gaactcaaaggtcatgcttctccgattgaaaaagtcgccttcaaccctgtcaaggatgct
gaactctgcagcgtcagtagcgatggcgctgtcaagatctgggacgtaaggacaaaggca
tgtgtcaacgaggtcaaggtttctggacacgccacgtccctggcctgggcacccgatgga
tcgtccttactcgttggtagcaagaatggtgatttgttccacattctgccctcccagtct
tccatcatttcgacccaccatcaaccggtcggcacaaatcagatggctttctgttggagt
ggtgacaaggtgtttctgcccaccaacgaaggaaggatacgcattttgtcctaccccgac
tttgaacctgtcctgcatgtgaactacgccgtccccgagggcgaatcgactgaattcacc
ctcaaaggccatacagcgtcttgcctaacggctgagctctctcccacgggcaaatacctg
gcaacgggaggcgccgattccatcatttccttgtttgacaccaaagactggatttgccag
cggacagtaacccgcatggttgggccggtcaaaagcataagtttcacatttgatggtagt
tatgtggtcggtggctgtgaagaaggtggtagcttggaagttactcataccgagacaggc
gagcatgtccacaccttcaagacagctggtacttgtgaagcagtggcatgggcacctacc
agatactgccttgcttacagtgatctaggcgtactccgcatcatcggcgtggacacggat
agaaagtga

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