Neurospora crassa: NCU03517
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Entry
NCU03517 CDS
T01034
Name
(RefSeq) Ski8
KO
K12601
superkiller protein 8
Organism
ncr
Neurospora crassa
Pathway
ncr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ncr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCU03517
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncr03019
]
NCU03517
Messenger RNA biogenesis [BR:
ncr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
NCU03517
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40
WD40_Prp19
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
WDR55
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
Beta-prop_DCAF12
Beta-prop_WDR35_TULP_N
WDR90_beta-prop_4th
Beta-prop_Vps41
Beta-prop_WDR75_1st
Beta-prop_SPT8
eIF2A
Beta-prop_Nup120_160
Beta-prop_VPS8
Beta-prop_NUP159_NUP214
Hira
WD40_RFWD3
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Nucleoporin_N
PALB2_WD40
DHHA1
Motif
Other DBs
NCBI-GeneID:
3872020
NCBI-ProteinID:
XP_955873
UniProt:
Q7RVN5
LinkDB
All DBs
Position
II:complement(406059..407724)
Genome browser
AA seq
342 aa
AA seq
DB search
MSKQYLTLHTVDQAHPTEIFSLAPTPNALISASGSSHLLIHSTTTSPTFPLTQTLSNAHR
LGCHHITTARGGPGNTFVSVGFGGDTKVWHRNPETDQWSLYWTLPTPDNKKEKGDVWAVA
LSADEGYLAATTSDGRIHVWDVLGKAKIQTYETGASAGGGGGHDSVGTGSFAMAVDLSRD
GKFTASGHENGGVYVFNNDAGRMVYSLSGLAKPIRAVAFSPGCKRLAAAGNAGIIAIYDM
QHGEHVANLSATGTRPAWITSIDWNDTGEYLLSGSLDGKVRVWDVARGVCVATHSETESA
LWCVRWLPKSEKVLAPGMGKGEMFVAAGANRSLTFYREATGS
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaacaatacctaaccctccacacggtggaccaagcccacccaaccgaaatcttc
tctctagcccccacccccaacgccctcatctccgcctccggctcctcccacctgctcatc
cacagcaccaccacctcacccacctttcctctcacgcaaaccctctccaacgcccaccgc
ctcggctgccaccacatcaccaccgcccgcggcggtcccggcaacacgtttgtctctgtc
ggtttcggcggcgacaccaaagtctggcaccgcaaccccgaaaccgaccagtggtcgctc
tactggacactcccgacccccgacaacaagaaggaaaagggcgatgtctgggccgttgcg
ctgagtgcggacgagggatatctagcggctacgacaagcgacggacggattcacgtgtgg
gatgttttggggaaggcaaagatacaaacctacgaaacgggggcgagtgcaggtggtggt
ggtggacacgacagtgtagggacgggcagctttgcgatggcggtggatttgagtagggat
ggcaagtttacggcgagtggacatgagaatggcggggtgtatgtgtttaataatgatgcg
gggaggatggtttattcgctttctggcctcgcaaaaccaatccgcgccgtcgccttctcc
cccggctgcaagcgtcttgccgccgctggcaacgcaggcatcatcgccatctacgacatg
cagcacggcgagcacgtcgccaacctatctgccacgggcactcggcccgcatggattaca
tcgatcgactggaacgacacgggcgaatacctgttgagcggatcgctggacggcaaagtc
agggtgtgggatgtggcgaggggtgtctgtgtcgcgacgcacagtgagacggaaagcgcc
ctctggtgtgtgaggtggttgccaaagtcggagaaggtgctcgccccggggatgggtaaa
ggggagatgtttgtggcggcgggagcgaatagaagtttgacgttttaccgggaggctact
gggtcatag
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integrated database retrieval system