Neurospora crassa: NCU03606
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Entry
NCU03606 CDS
T01034
Symbol
rpa-1
Name
(RefSeq) replication protein A-1
KO
K07466
replication factor A1
Organism
ncr
Neurospora crassa
Pathway
ncr03030
DNA replication
ncr03420
Nucleotide excision repair
ncr03430
Mismatch repair
ncr03440
Homologous recombination
ncr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ncr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCU03606 (rpa-1)
03420 Nucleotide excision repair
NCU03606 (rpa-1)
03430 Mismatch repair
NCU03606 (rpa-1)
03440 Homologous recombination
NCU03606 (rpa-1)
03460 Fanconi anemia pathway
NCU03606 (rpa-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncr03000
]
NCU03606 (rpa-1)
03032 DNA replication proteins [BR:
ncr03032
]
NCU03606 (rpa-1)
03400 DNA repair and recombination proteins [BR:
ncr03400
]
NCU03606 (rpa-1)
Transcription factors [BR:
ncr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
NCU03606 (rpa-1)
DNA replication proteins [BR:
ncr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
NCU03606 (rpa-1)
DNA repair and recombination proteins [BR:
ncr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
NCU03606 (rpa-1)
MMR (mismatch excision repair)
NCU03606 (rpa-1)
DSBR (double strand breaks repair)
HR (homologous recombination)
NCU03606 (rpa-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
CDC24_OB3
DUF223
POT1
zf-like
Motif
Other DBs
NCBI-GeneID:
3877515
NCBI-ProteinID:
XP_961333
UniProt:
Q1K7R9
LinkDB
All DBs
Position
V:1823529..1826208
Genome browser
AA seq
610 aa
AA seq
DB search
MAGQITQGALDAMFNDPDRAQQQFPVPILQCLQIKTLDSKNGGAGATERFRIVLSDLKNY
VQCMMATQTNHLVHDGLLQRGCIVRLKQYQAQCLKGKNILIVLDLEVIQSLGCPEKMGDP
QPLGPRSAEPQQNPNLGSTGFYGVKSEPTQDTKPQFPRQMPSRNASGGQGSSTIYPIEGL
SPFSHKWTIKARVTSKSDIKTWHKASGEGKLFSVNFLDESGEIRATGFNDQVDQFYDLLQ
EGQVYYISTPCRVQLAKKQWSNLPNDYELTFERDTVIEKAEDQTSVPQVRFNFVNIQELQ
DVERDATVDIIGVLKEVQEVTQIVSKTTQKPYDKRELTLVDNTGYSVRCTIWGKTATNFD
AQPESIVAFKGTKVSDFGGRSLSLLSSGTMAIDPDIPEAHHLKGWYDSSGRNNTFATHNN
MQTLGGATGRKDDAKTISQVKEENLGTNEAPDYFALKATVVFIKQDNFAYPGCRSEGCNR
KVTDMGDGTWRCEKCQINHDRPQYRYIMSVNVNDHTGQLWLSCFDDTARVIMGKSADELM
EIRETDETRLPAEFEQANCRKLNFRCRAKMDTFGEQQRIRYQVMSVAPLDYKMEGNKLNE
LINSYNQMSM
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtcaaatcacacagggcgctctggacgccatgttcaatgatcccgatcgcgca
caacaacagttccctgtccccatccttcaatgtctccagatcaagaccctcgactccaag
aatgggggcgcgggcgccacggagaggttccgcattgtgctgagcgacctcaagaactat
gtccaatgtatgatggccacgcaaacaaaccatcttgttcacgatggcctcctgcaacgc
ggctgcatcgtgcgcttgaagcagtatcaagctcaatgtctcaagggcaaaaacatcttg
attgtcctcgatctcgaagttatccagtcccttggctgtcccgaaaagatgggcgatcca
cagcctcttggcccccgcagtgcagaaccacagcagaaccccaatctcggcagcaccggc
ttctatggcgtcaagagcgaacctacccaagacacgaaaccacagtttccacgccagatg
ccctcgcgtaatgccagcgggggtcagggatcaagcacgatatatcctattgaaggtctc
tcgcccttctcgcacaaatggaccatcaaggccagagtcacctccaagtccgatatcaag
acctggcacaaggctagcggcgagggcaagctcttcagcgtcaactttcttgacgagagt
ggcgaaattagagcaacaggattcaacgaccaagtcgaccagttctatgatttgctacag
gagggtcaggtttactacatttctacaccttgcagggtacagcttgccaagaagcaatgg
tcgaatctccccaatgactacgagctcacctttgagcgggataccgtgatcgaaaaggcc
gaagaccagacatctgtaccacaggtacgcttcaactttgtcaacatccaggagcttcag
gatgttgagagggatgcgactgtcgatattattggtgtcctcaaggaggtccaagaggtg
acccagattgtatccaagaccacacagaagccgtacgacaagcgcgagctgacccttgtt
gacaacactgggtactcggtacgttgtaccatctggggtaagacggccacgaactttgat
gctcagcctgaatccattgtggccttcaagggcacaaaggtcagcgatttcggtggacgc
agcttgtccctgctttcgtctggcaccatggccatcgatccggatattccagaggcccat
catctcaagggctggtatgatagcagcggcaggaacaacaccttcgccacccacaacaac
atgcagaccttgggtggtgcgaccggtcgcaaggacgacgccaagaccatctcacaagta
aaggaagagaaccttggcacaaacgaggcgccggattacttcgctctcaaggcaacggtt
gtattcatcaagcaggataactttgcctaccctgggtgccgaagcgaaggctgtaacagg
aaggtcacagatatgggtgatggtacctggcgctgcgagaagtgccagatcaaccacgat
agacctcagtaccgttacattatgagcgtcaacgtcaacgaccacacaggtcaactttgg
cttagctgcttcgacgatacggcgcgggtcatcatgggcaagtcggccgatgaacttatg
gagattcgagagaccgacgagacgcggttgcccgccgagtttgagcaggccaactgccgc
aagctgaactttaggtgcagggcgaagatggacacatttggtgaacagcagaggattcga
taccaggtcatgagcgtggcgccccttgactacaagatggaaggaaacaagcttaacgag
ctcatcaattcttacaaccaaatgagcatgtaa
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