KEGG   Neurospora crassa: NCU03625
Entry
NCU03625          CDS       T01034                                 
Name
(RefSeq) small nuclear ribonucleoprotein Sm D3
  KO
K11088  small nuclear ribonucleoprotein D3
Organism
ncr  Neurospora crassa
Pathway
ncr03040  Spliceosome
ncr04139  Mitophagy - yeast
Brite
KEGG Orthology (KO) [BR:ncr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    NCU03625
 09140 Cellular Processes
  09141 Transport and catabolism
   04139 Mitophagy - yeast
    NCU03625
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ncr03019]
    NCU03625
   03041 Spliceosome [BR:ncr03041]
    NCU03625
   03032 DNA replication proteins [BR:ncr03032]
    NCU03625
Messenger RNA biogenesis [BR:ncr03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     NCU03625
Spliceosome [BR:ncr03041]
 Complex A
  U1 snRNP components
   Sm proteins
    NCU03625
  U2 snRNP components
    NCU03625
 Complex B
  U1 snRNP components
    NCU03625
  U4/U6.U5 tri-snRNP components
    NCU03625
 Complex C
  U2 snRNP components
    NCU03625
DNA replication proteins [BR:ncr03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     NCU03625
SSDB
Motif
Pfam: LSM Ribosomal_S21e
Other DBs
NCBI-GeneID: 3877475
NCBI-ProteinID: XP_961352
UniProt: Q1K7Q8
LinkDB
Position
V:complement(1887650..1889608)
AA seq 116 aa
MTSTIGIPIKLLNEAQGHIVTLEITSGQTYRGKLIEAEDNMNVQLKDITVTARDGRVSHL
EQVYIRGSHVRFFIVPDMLRNAPMFRSRNVRGRGVGLARGRATVSRARAGGRGGAR
NT seq 351 nt   +upstreamnt  +downstreamnt
atgacttccacaattggtatccccatcaagctcctcaatgaggctcagggccatatcgtc
actctcgagatcacctccggccagacctaccgtggcaagcttatcgaagccgaggacaac
atgaacgtccaactcaaggacatcaccgtcacagcccgcgacgggcgcgtcagccatctc
gaacaagtctacatccgcggcagtcatgtgcgattctttattgtgccggatatgttgaga
aacgcccccatgttccgctcccgcaacgtccgcggccgcggtgtcggtctcgcccgcggt
cgtgcgacagtcagtagggcgcgcgccggtggtcgtggcggcgccagatag

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