KEGG   Neurospora crassa: NCU03838
Entry
NCU03838          CDS       T01034                                 
Name
(RefSeq) transcription elongation factor spt-4
  KO
K15171  transcription elongation factor SPT4
Organism
ncr  Neurospora crassa
Pathway
ncr03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:ncr00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    NCU03838
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ncr03021]
    NCU03838
   03019 Messenger RNA biogenesis [BR:ncr03019]
    NCU03838
Transcription machinery [BR:ncr03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     NCU03838
  RNA polymerase I system
     NCU03838
Messenger RNA biogenesis [BR:ncr03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    DRB sensitivity inducing factor (DSIF) complex
     NCU03838
SSDB
Motif
Pfam: Spt4 RNHCP
Other DBs
NCBI-GeneID: 3876744
NCBI-ProteinID: XP_960597
UniProt: Q7S743
LinkDB
Position
V:2573216..2574408
AA seq 120 aa
MSENYVAPGQQRYLRACMVCSIVMTYARFRDEGCPNCEDFLHLQGSPDQIDSCTSQVFEG
IITIANPQKSWVAKWQRLDGYVKGVYATKVSGQLPDDVRTTLEDDGIQYIPRDGSATEAD
NT seq 363 nt   +upstreamnt  +downstreamnt
atgtcggagaactacgttgcccccggccagcagcgctaccttcgtgcctgcatggtctgc
tctatcgtcatgacctatgctcgcttccgtgacgaaggatgccccaactgcgaagacttc
ctccatctccagggctcgccggatcagatcgacagctgcacgtcgcaagtctttgaagga
atcatcaccattgccaacccgcagaagtcgtgggtggcgaagtggcagaggctggacggt
tatgtgaagggtgtatacgcgaccaaggtgtcgggccagttgccggatgacgtgcgcacc
acgttggaggatgacggcattcagtatatcccgcgcgatggcagtgcgacggaagcggac
tag

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