Neurospora crassa: NCU03855
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Entry
NCU03855 CDS
T01034
Name
(RefSeq) CCR4-NOT transcription complex
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
ncr
Neurospora crassa
Pathway
ncr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ncr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCU03855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncr03019
]
NCU03855
Messenger RNA biogenesis [BR:
ncr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
NCU03855
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
NCU03855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
EAD9
DUF1192
DUF7310
WKF
Transcrip_reg
TEDC1
Med10
Cep57_MT_bd
Motif
Other DBs
NCBI-GeneID:
3872012
NCBI-ProteinID:
XP_011394869
UniProt:
V5IKZ2
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All DBs
Position
VI:1896965..1900506
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AA seq
640 aa
AA seq
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MAARKLAQEVDKCFKKVAEGVQEFEAIYEKIEQSNNPAQKDKLEDNLKREIKKLQRLRDQ
IKTWAASNDIKDKAPLLEHRRLIETQMEKFKAVEKAMKTKAYSKEGLSAAAKLDPKEQAK
LEAGEFLSQMVDELEQQIETLEAESESIQATMKRGKGHGAKADRISEIERIIERHKWHQG
KLELIRRSLENGGVETEQVNELEESIRYYVTDGMNEDFMDDEGIYDDLNLEEEEDAYGMN
VDNDKGSSQDAQSIQDEPEPEPKPASVPATKQRTPADTVAASSIRRSSAQLKSPLPTLAT
VHNNTMPSISNTPASNVSMKPASLPTRPAEGLKYASAAAAAAASDKSGVGIAPLPPPPTT
NSSLPASQHVKTSAANSPSVATVQPVAQERIVNAVLPAVGGSVTNTPVPSKTEPAKNVSS
RDKASAPVPAATATTSKATPEPEAVKTQPQVPQTNGATNGIKPIEEVEEEESIYHLPASL
QDLVESYEVTKKCPASVDALATQRMHAVAVANKPSALDTELPRPYYPDVRYHTHNQFPQE
PLAIFEDPRLYQRIDPDTLFYVFYYKQGTYQQYLAAKALKDQSWRFHKQYQTWFQRHEEP
KSITEEFEQGTYRFFDYESTWMNRRKADFKFTYKFLEDEV
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccgaaagctcgcgcaagaagttgacaagtgttttaagaaggtggcagaaggc
gtgcaggagttcgaggccatctacgaaaagattgagcagtccaacaaccccgcgcaaaag
gacaagctggaggacaacctgaaacgagaaatcaagaagctgcaaaggcttcgagaccag
atcaagacatgggccgcaagcaacgacatcaaggacaaggctcctttacttgagcatagg
cgcctgatagagacgcaaatggaaaagtttaaggctgtagaaaaggccatgaagaccaaa
gcgtattccaaggaaggtctgtcggctgcggcgaagctagaccccaaagagcaagccaag
ttggaagcaggcgaattcctcagccagatggtcgacgagctcgaacagcagattgaaact
ctcgaggccgagagtgagtcaatacaagccaccatgaagaggggcaagggacatggcgcc
aaggccgaccggataagcgaaatcgagcgcatcattgaacgacacaaatggcatcagggg
aagctggagctgattcggcgatctttggagaacggcggcgtcgagaccgagcaagtgaat
gagctggaagaaagcatcagatactacgttaccgatggcatgaatgaggatttcatggac
gacgagggtatttacgatgacctgaacctggaagaagaagaggatgcctacggaatgaat
gtcgacaacgacaagggatcctcacaggatgcccagtcgatccaggacgagcccgagccc
gagcccaagccggcgagcgtaccggcgacgaaacaacgtaccccggccgatacagttgca
gcatcatcgatacgacgctcttctgcgcagttgaagtcgccactaccgacgttggcgacg
gtccacaacaatacaatgccaagcattagcaatacaccggcgagcaatgtgtccatgaaa
ccggcatcactgcccacgaggccggccgagggcctaaaatatgccagtgcagcagccgcg
gcagccgccagcgataagagtggtgtaggaatcgcgcccctgcccccgccgccaacaacc
aactcatcgctaccggcatcacaacacgtcaagaccagcgcagcaaactcccctagcgtt
gcaacagtgcagcctgttgcccaggagaggatagtaaatgcggtactcccggctgttggc
gggtcggtaacaaatactccggtaccgagcaagactgaaccggccaagaacgtgtcttct
cgtgacaaggcatcggcaccagtcccagctgccacagcaacgacttccaaagcaacaccg
gaaccagaagccgtgaagacccagccccaagtgccccaaaccaacggtgcaaccaatggt
attaagcccatcgaggaagtggaagaagaggagtcgatttaccatctaccagcgtccttg
caggacctggtcgagtcatatgaggttaccaagaagtgcccagcatctgtggatgcgctt
gccacgcagaggatgcatgcggtggcggtagcgaacaagccgagtgctcttgacactgag
ctaccacgaccctactatcccgatgttaggtaccacacgcacaaccagttcccgcaggag
cccctggccatatttgaagacccccgtctctaccagcggattgatccggacaccctcttt
tacgtcttttactacaaacagggaacttaccagcagtacctcgccgccaaggcactgaaa
gaccaaagttggaggtttcacaaacagtaccagacgtggttccagcgacacgaagaacca
aaatcgatcacggaggaattcgaacaaggaacctatcgtttctttgactacgagagcaca
tggatgaatcgcaggaaggccgacttcaaatttacctacaagttccttgaggacgaagta
taa
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