Neurospora crassa: NCU03962
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Entry
NCU03962 CDS
T01034
Name
(RefSeq) hypothetical protein
KO
K15165
mediator of RNA polymerase II transcription subunit 13, fungi type
Organism
ncr
Neurospora crassa
Brite
KEGG Orthology (KO) [BR:
ncr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncr03021
]
NCU03962
Transcription machinery [BR:
ncr03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
NCU03962
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med13_C
Med13_N
MID_MedPIWI
Motif
Other DBs
NCBI-GeneID:
3873723
NCBI-ProteinID:
XP_957601
UniProt:
Q7RZA6
LinkDB
All DBs
Position
VI:2249217..2254739
Genome browser
AA seq
1542 aa
AA seq
DB search
MDTGDYDTNTLLINNLSAISFRVYEPVAANTASYTFQPQVVEDALRRDGHLVHVDTTRRC
IWVFYLTTKDGSMLGPEERGLTAKMEVCGYSLGLSGEGGFEPSSLFRSRQLGTNSLNTPN
SSSSAGSVVDAAFRNPQASAFPTAAGVMPGAPVMDNKGASHILSDSDRFAHVPLKEKYDF
FITATLASLSSSLCHTIGAIPLDHRSILLPSQAYYLDEFILGPKPQSCALGTFRVYLTST
GTLVISLSVSLLEGLASFAELARSNMLPSNPVVLAAPLGAFGFMLNPVDGDMYGLDSGYG
HSPDTQISRLKPDPTDRLSQWKATCCKVLQMRGISPSLINGCSWFNVHFLQRKPYEHRQD
AKRPPLTNPPQIAAWPSVLCFRKPRIDAGADSRSSKALVASASESLDPVDDARQWCQGFP
EREETIAKRKKERDEREALAAVSRSIADADSKNNQISAASPMALRRPSNGGAIAASSAMY
PTPPDGIQPLGMAASAETGFAASPANQPQHNAMAGIDTVMKNNAPHTENFGNGWEGGDNK
REQQAGNLLEGDNMFGDLGEDMFEGNELTDADFNFFDEQLNEQTEGVEMNFSAISGLGTT
TDLSADAGQPTNSAPQTNNRVEDYKTIPQPAPPEFTKPELKHARSTLAEGSRQQANQESF
NRNSTIGIKRPHSPFNRETVYKRIKASLLSPPKPRSPTTALSQRRKSEFDKVDFDPSLSL
VNKKYTENGPFNYMIPAVQEMQKTRLELQNPLLTRVEKPPKEPPSNFGALLARIAHGIGG
SLTGRDEVASETDDSSWASDPDDLSDESNYAPSLAKSGISRRRLDDDVLSTAASFKDLES
AVADTPAYGSIDLVRLSHPEVPEFSIAKYFADPEPARLQVSFSDTNFITIAQILTEQVAT
GSLQIAPRILSRKPQDVRRTLAKAVRYSMQGLRKALPRSLADAIECSLKPYADVQDVPLV
ALAQPQRIQAKPMGSEMSTRNIYPIPTPHIEIRRYETPFSMLPTAISFWESLGLSPAKGA
KDIVSVCLFPNVDGLRDSASAFLQRIRSVYESLKLGTFDILPTVPDLEDGLLSYFATQQP
AVRDEWAVSPFNGPMSCLANALKSVQMTEKNYVVFFVYPDDRPNSVVESCAAFHDLYERY
KQCMADIGKPVTSELVLQLVPLDCIASDTTVTVMSPVDYMKLCLETYDRCTLFGGPMPAP
AIVLEPQVLRTIDFKLNTNPSPNLLQENSCMHVAYAQSVDERWITAAWTDYRGTRQMTTS
YCLGRRDRPLTRSITEIIQQIWEATMDHIHFARVHWRVVVTKCSPMEQQEIEYWASLQQS
ETYANVSLTLLTVDTNPSLQLIPPAQRIQIPSAALSSNSPASTPQASVLSPDQSGLGPPT
PIGTGSSNSANAATDNNNNSNNNNNTTTTTTTTTDTDADSTLVDQLDMTWAVIAAHRLNN
STSLTELNQALASGYLVKRGGPKLEDVPVTMEVNVIHCEGINIPQPHQYPRVYEQLLREM
LSHFRGLGTLARARGVVDRETDVRPWHVAVAEKAVRALYLLM
NT seq
4629 nt
NT seq
+upstream
nt +downstream
nt
atggacactggcgactatgataccaataccttgctaattaataatctttccgccatttct
tttcgcgtttacgaacccgttgccgccaacacagcctcttacaccttccagccacaagtc
gtcgaggatgccttgcgccgggatggccacctcgtccacgtcgataccacccggcgatgt
atatgggtcttttacttgacaaccaaggatggctccatgttgggacccgaggagcgaggg
ctcaccgccaagatggaggtctgcggttactcgttaggcttgtctggagaaggcggcttt
gaacccagtagcttgttcagaagcagacagcttgggacaaactctctcaacactccaaac
agctcgtcctctgccggttccgttgttgacgctgcattccggaatccgcaggcctctgcc
tttcctaccgcagcaggtgtcatgcccggcgctccagttatggataacaagggcgcgtcg
cacatactttcggactcggatcgcttcgcccatgtgccattaaaggaaaaatacgacttc
ttcattactgcgaccctggcatctctgtcctcttcgttgtgccacacgataggagccatt
ccgctggaccataggtcgatattgctcccctctcaagcatactacttggatgagttcatc
ctaggcccgaagccgcaaagctgtgcccttggtacttttcgcgtctatcttacatcgacc
gggacactcgtcatttctctttccgtctctttgcttgagggattggcatcttttgcggag
ctggcgcggtcaaacatgctcccatcaaacccagtggtgcttgctgctcctcttggagca
ttcggtttcatgctgaacccagtggatggggacatgtatggacttgatagcggctatggc
cattcgccagacacccaaatcagtcgtctaaagccggatccaaccgataggctctcacaa
tggaaggcaacgtgttgcaaagtactccaaatgcgtggtatatcgccttcgctgatcaat
ggctgctcctggttcaatgttcacttcctgcagcgaaaaccatacgaacacaggcaagac
gccaagagacctcctttgacgaacccacctcagatcgcggcttggccatcggtgctttgc
tttagaaaaccgaggatcgatgctggcgctgatagccgttcatccaaggcactggtggcg
agcgcatccgaatcgctagatccggtagatgacgcgaggcaatggtgccaaggatttcct
gagcgagaagagacgatcgcaaagcgaaagaaggaaagagacgagagggaggcgctagca
gccgtgtctcgcagtattgctgacgctgattcaaagaacaaccagattagtgctgcgtcg
cctatggcgttgcgccggccgagcaacggtggggccatagccgcttccagtgcaatgtac
ccgacacctccggatggaattcaaccattaggcatggctgcctctgccgagacaggcttc
gctgccagtcctgcaaaccagccccagcataacgcgatggctggcatagatactgtgatg
aagaacaacgccccccatacggagaactttggcaatggctgggaaggcggcgacaacaag
cgggagcagcaggctgggaatctattggagggtgacaatatgttcggcgatctcggggaa
gacatgttcgaaggcaacgagcttaccgatgctgatttcaactttttcgacgaacaactc
aacgaacagaccgagggtgtcgagatgaatttcagtgcaatatcaggactgggaacgaca
acggatttgtccgctgatgcgggtcaaccaactaactcagctccccagactaacaacaga
gtggaagattacaagacgattccgcagccagcgcctccagaattcaccaaacccgagctt
aaacacgcacgcagtaccctcgctgaaggaagtcgacaacaagcaaatcaagagagcttc
aatcgtaattccacgatagggatcaaaagaccgcacagcccctttaaccgagagactgtg
tacaagcgaatcaaggcctcacttctgtcgcctccgaaaccacgatctcctactacagca
ctttctcagcgacgaaagagcgaattcgacaaggttgatttcgacccttcactatccctg
gtcaacaaaaagtacaccgagaacggccccttcaattacatgattccggccgtgcaagaa
atgcaaaaaacgcgattagaactgcaaaatcctctattgacgagagtcgaaaaacctccc
aaggaacctccaagtaactttggggctcttctagcgaggatagctcacgggattggcggt
agcttgacaggccgcgacgaagttgcgtcagagacggatgactctagttgggcgtctgat
ccagacgacttgagcgacgagagcaactacgcaccctctctcgccaagtcaggaatttca
aggcgacgtctggacgacgatgtcctctcaactgctgcttctttcaaagacctcgaaagt
gctgtggcagatacacctgcatatgggtcgattgatttggttcggttatctcaccccgag
gtgcccgagttttctatcgccaaatattttgcagatccagagccggcacggctccaggtt
tctttttctgatacgaatttcattaccattgctcaaatccttaccgagcaagtggcgacc
ggttcgctacagatcgctcccagaatcttgagccggaagccccaggatgtgcgcagaacg
ttggccaaagcagtgcggtactccatgcaagggctacgaaaggccctgccacggtcacta
gccgatgcgattgagtgttcgctcaagccatacgcagatgtacaagatgtgcctttggta
gcactggcgcagccacaacgtattcaagctaagccgatgggttcagaaatgtcaactcga
aacatctacccgataccaacaccccatatagaaatccgccgctatgaaactcccttctcg
atgctgccaacagccatcagtttctgggaaagtttaggccttagtccggcaaaaggcgcc
aaggatattgtatcagtttgcttgttccctaacgttgacggcttacgggatagcgcttct
gcctttttgcagcggatacgcagtgtttacgaatccctgaagttagggacgtttgatatc
ctccctactgtcccggatctcgaggatgggcttctatcatacttcgcgacccaacaacca
gctgttcgtgatgaatgggctgtgtcgccgttcaatgggcccatgagttgcctcgcaaat
gcactaaagagtgtccagatgacggaaaagaactacgttgtcttctttgtctacccagat
gataggccaaattcggtcgtggaatcatgcgccgccttccacgatctctacgagcgctac
aagcagtgtatggcagacatcgggaagccggtcacgagtgagctggtccttcagctggtt
ccgcttgactgcattgcgtcggacacaactgtgacggtgatgtctcccgtcgattacatg
aagctgtgtcttgaaacatacgatcgctgcacgctctttggtgggcctatgccagcgccc
gccatcgttttagagccacaggttctgcgaacgatcgacttcaagctcaacacaaacccg
tccccgaatttgctccaggagaactcatgtatgcacgttgcttacgcgcaaagcgtggac
gagcggtggattactgccgcctggacggattatcgaggaacgaggcagatgaccacatca
tattgtctcggtcggagagacaggccgctcaccaggtctataaccgagatcatacagcag
atatgggaggccaccatggaccatattcacttcgcacgggtgcattggcgggtcgttgtc
accaaatgcagccctatggaacagcaagagatcgagtactgggctagcttgcaacaatcc
gaaacttatgcgaacgttagcctaacgcttctaacagtcgacaccaacccgtcgctacaa
ctcatcccgccagcgcaaagaatacagatcccatcagctgctctttcgtcaaacagcccc
gcttccacaccccaagcctccgttctctcacccgaccaaagcggcctgggtccaccaacc
ccgatcgggaccggctcgagcaatagcgccaacgccgccaccgacaacaacaacaacagc
aacaacaacaacaacaccaccaccaccactaccaccaccaccgacactgacgccgactca
acgctcgtcgaccaactagacatgacctgggccgtcattgccgcccaccgcctcaacaac
tcgacatcgctcaccgaactcaaccaggccctcgccagcggctatctcgtcaagaggggc
ggcccaaaactggaggacgtgcccgtgacgatggaggtgaacgtgatccactgcgagggt
atcaacattccgcagccgcatcagtatccgagggtgtacgagcagctactcagggaaatg
ttgtcgcactttcgggggctggggacgctggcgagggcgaggggtgtggtggatcgggag
acggatgtcaggccgtggcacgtagcggtggcggagaaggcggttagggcgctttatctg
ttgatgtaa
DBGET
integrated database retrieval system