KEGG   Neurospora crassa: NCU04063
Entry
NCU04063          CDS       T01034                                 
Name
(RefSeq) protein transporter sec-13
  KO
K14004  protein transport protein SEC13
Organism
ncr  Neurospora crassa
Pathway
ncr03013  Nucleocytoplasmic transport
ncr04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ncr00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    NCU04063
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    NCU04063
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ncr03019]
    NCU04063
   04131 Membrane trafficking [BR:ncr04131]
    NCU04063
Messenger RNA biogenesis [BR:ncr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     NCU04063
Membrane trafficking [BR:ncr04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    NCU04063
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    NCU04063
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    NCU04063
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40 WD40_Prp19 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_WDR3_2nd WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd WDR55 Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_C EIF3I Beta-prop_IFT122_1st Beta-prop_WDR19_1st WD40_Gbeta Beta-prop_WDR36-Utp21_1st Beta-prop_Vps41 Beta-prop_IFT140_1st WD40_RFWD3 Beta-prop_WDR35_TULP_N Beta-prop_SCAP Beta-prop_WDR75_2nd Beta-prop_EML Beta-prop_HPS5 Kelch_FKB95 YmzC
Other DBs
NCBI-GeneID: 3873801
NCBI-ProteinID: XP_957678
UniProt: Q7RZF5
LinkDB
Position
VI:2623282..2624994
AA seq 304 aa
MTAGAQVIANSGHDDMIHDAVLDYYGRRLATCSSDRTIKIFEIEGESQRLVETLKGHDGA
VWSVAWAHPKYGNILASAGYDGKVLIWREQAGSWQRIFDFALHKASVNIVSWSPHEAGCL
LACASSDGNVSVLEFKDNSWEHNIFHAHGLGVNSVSWAPATTPGSIVSSNPGPGSTGNRR
FVTGGSDNLLKIWTFDPATNGYKLEREPLAGHTDWVRDVAWSPTVLQKSYIASASQDKTV
RIWTSDAANPGEWKCKVLNFDAAVWRVSWSLSGNVLAASSDNNKVTLWKENLKGEWENVK
TIEE
NT seq 915 nt   +upstreamnt  +downstreamnt
atgaccgcaggcgcacaggttatcgccaactctggccacgatgatatgattcacgatgca
gttctcgactactacggcaggaggttagcgacatgctcctcggatcgcaccatcaagatc
ttcgagatcgagggcgaatcacagcgacttgttgagacattgaagggacacgatggcgca
gtttggtccgtagcatgggcgcaccccaagtacggcaacatcctcgcctcggcaggctac
gacggcaaggttctcatttggcgcgagcaagccggcagctggcagcgcatcttcgacttc
gccctacacaaggctagcgtcaacatcgtgtcctggtctccccacgaagccggatgcctc
ttggcctgcgcctcttcggacggcaacgtcagcgttctcgaattcaaggataacagctgg
gagcacaacatcttccacgcccatggcctgggcgtcaactcggtctcgtgggcccccgcc
accacccccggcagcatcgtcagcagcaaccccggccccggctcgacgggcaacagacgc
ttcgtgactggcggttccgacaacctgctcaagatctggaccttcgaccccgcgaccaac
ggatacaagctcgagcgcgagcccctggcgggtcatacagattgggtgcgcgacgttgcg
tggagcccgactgtgcttcagaagagctatatcgcaagcgcctcgcaggacaagacggtg
cgcatctggacgagtgacgcggcgaacccgggcgagtggaagtgcaaggttctcaacttt
gatgcggccgtctggcgcgttagctggtcgctcagcggaaacgtgctggccgccagcagt
gacaacaacaaggtcacactatggaaggagaaccttaagggcgagtgggagaacgtcaag
accattgaggagtaa

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