KEGG   Neurospora crassa: NCU04136
Entry
NCU04136          CDS       T01034                                 
Name
(RefSeq) transcription initiation factor TFIID subunit
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
ncr  Neurospora crassa
Pathway
ncr03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:ncr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    NCU04136
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ncr03021]
    NCU04136
   03036 Chromosome and associated proteins [BR:ncr03036]
    NCU04136
Transcription machinery [BR:ncr03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     NCU04136
   Coactivators
    SAGA/TFTC/STAGA complex
     NCU04136
Chromosome and associated proteins [BR:ncr03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     NCU04136
    STAGA complex
     NCU04136
    TFTC complex
     NCU04136
    SAGA complex
     NCU04136
    SLIK complex
     NCU04136
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st TFIID_NTD2 Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_Prp19 Beta-prop_WDR3_2nd WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_EML EIF3I Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd WDR55 DSE1_N ANAPC4_WD40 Beta-prop_Aladin Beta-prop_HPS5 Beta-prop_WDR19_1st Beta-prop_VPS8 Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_WDR75_1st CFAP251_N ASA1 NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_WDR41 LisH Beta-prop_NOL10_N Tricorn_2nd eIF2A LisH_SSDP Beta-prop_SPT8 LisH_PAC1 Dimer_MINDY4_N LisH_UCP007778
Other DBs
NCBI-GeneID: 3877456
NCBI-ProteinID: XP_961292
UniProt: Q1K7L8
LinkDB
Position
V:4961594..4965433
AA seq 801 aa
MSNPPPANTGQAPGGATYGGGQQHQQPQSTTGGAPTTGGTGGTGAAGTTSTSSTAPTPQN
LNQIVTDYLKKKGFTKTEAVFRQETAHLGPDGRPAQRNEENGPRKYLKAFILLRDWIENN
LDIYKFELRKLLWPVFVYSYIELVSTGYVEEAKHYLATLRPHFDAVHREALDLFTTVTLP
QHIRENQTIKLYRENKYRIPLNQSLSGNLFHFLEREADAGGSTITFILQTFCQVDVSARG
PIEPFSFEAIYRRAHNLDLDEIDQLEGIPGVFTGVTNRDVLDSSAPLKLGPLPMEPELRE
DVRAELEDEDQRHPPVEGRSTLVEEFDQRIKREESADAPSRTDLPLPPSRARDVVMEMQK
VRENRDRFKIEGRTGGAGVPVSACMFTFHNSLGSVSCMDFSNDHELVAVGTMDSYIRVWS
MNGKPLRSSVASEKDLQVNNRKLIGHSGPVYGVSFSDSIANLDRNVFPEADGAKPDTSTK
LLVSCSADGQVRLWSLDHWACLCIYKAHDGPVFRVLWGPHGHYFATGGWDKTVRVFAQDR
ASALRIMVGHDTPISAIAWHPNGTYIFSASDDTDKSIRMWSVVTGNCVRIFTGHTDYISA
LQCAPNGKILASADTGGNIFFWDIAKGARIKRCRGHGKGGIPSLSFSAESNVLVSGGLDG
TVRLWDVELPADPSKSSQLAITSSGAAVGGGASGQQADGAASGDSIAVASGGGPNGNSIT
VGGTGSAATPAAAANATGNTGTASGSANGSSGAVTGKKKGKEVQITPDQISAFATKKTPV
LKVQFTRMNLVVAGGCYDPER
NT seq 2406 nt   +upstreamnt  +downstreamnt
atgtccaatcccccaccagcaaacaccggccaggcgccgggaggggccacatatggcggt
ggccaacaacatcaacaacctcagtctactactggtggtgcgccaacgacgggaggcaca
ggaggaacaggagctgcagggacgacctcgacgagcagtacggcgcccacacctcagaat
ttgaatcagatagttacggattaccttaagaagaaagggttcaccaagaccgaagccgtt
ttccgtcaagaaacagcccacctcgggcctgacggcaggcccgcgcagcgtaacgaggag
aacggaccgcgaaagtacttaaaggcgttcatcttgctccgagattggatcgagaataat
ttggacatctacaagttcgagctaaggaagctcttgtggcctgtcttcgtttactcctac
atcgagctcgtttccacggggtatgtggaagaagcaaagcactacctggcaacactacga
cctcattttgacgctgtccatcgtgaggcgttagacctgtttacgactgtcacccttcca
caacatattcgcgaaaaccaaacaatcaaactctaccgagagaacaagtatcgaatcccg
ctcaaccagtcactttctggcaacctcttccactttctcgagcgcgaggcggatgctggc
ggctcaacaatcacatttatcctccaaaccttctgccaggtagacgtcagcgcaaggggg
cccattgagccattcagctttgaggctatctaccgacgagctcataatctagatcttgat
gagattgaccagctcgaaggcattcctggtgttttcaccggtgttacaaacagagacgtt
ctcgactcatcagcaccgctgaagctcggccctcttccaatggaacctgaattgcgagaa
gacgtacgcgcagaacttgaggacgaggaccagcgacatccacctgtagagggcaggtct
acactcgtggaggagttcgaccagcggatcaagcgagaagagagtgccgacgctccctcg
agaacagacctccctcttccaccatctcgagccagggacgtcgtaatggagatgcaaaaa
gttcgagaaaatcgggaccggttcaagatagagggtcggactggcggtgcgggtgttcct
gtctcggcctgcatgttcacgttccataacagcttggggagcgtttcatgtatggacttt
tccaacgatcacgagctcgtggctgtcggaactatggactcttatatccgcgtctggtct
atgaacggaaagccattaagatcatctgtagccagcgagaaggatctacaagtcaacaac
cggaagctgatcggccactccggtccggtctacggcgtgtctttctcggattccattgcc
aacctggaccgtaatgtcttcccggaagccgacggggccaagcctgatacgagcaccaag
ctacttgtatcatgctcggcggacggtcaagtccgcctttggtccctcgaccactgggca
tgtctatgcatctacaaggcccacgatggtcccgtcttccgcgttctttggggtcctcac
ggccattacttcgcgactggcggctgggacaagaccgtccgcgtgttcgcgcaagataga
gcctctgcactgcgcattatggtcggacatgatacgcctatctcagcaatcgcgtggcac
ccgaacggaacgtacatcttctcggcatccgacgacaccgacaagtccatccgcatgtgg
tcggtagtgacaggcaattgcgtccgcatcttcacgggccacacggactacatcagcgcg
ctgcaatgcgcgccgaacggaaagatcctcgccagcgccgatacgggtggaaacattttc
ttctgggatattgccaagggcgcgcgtatcaagcggtgccgcggccacggcaagggtggt
attccgtcactaagcttcagtgccgagtcgaacgtgctcgtgtcaggaggcttggatggc
accgtgaggctgtgggacgtggagttgccggccgatcccagcaagagcagccagcttgct
atcacgagtagcggtgcggcggttggaggaggcgcatctggtcaacaggcggatggtgcc
gcgagtggcgacagtatcgccgtggcgtctggcggaggtcccaacggcaattcgattacc
gtgggtggcactggttctgcggctacaccagcagctgctgctaatgctaccggcaacact
ggcaccgctagcggcagcgctaatggcagcagtggtgcggtcacagggaagaagaagggc
aaggaggtgcagatcacacctgatcaaatcagcgcgttcgcgacgaagaaaactcctgtt
ttgaaggtgcagtttacaagaatgaacctggtggttgcgggcggatgctatgatcctgag
cgttag

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